'Nostoc azollae' 0708: Aazo_0668
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Entry
Aazo_0668 CDS
T01260
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
naz
'Nostoc azollae' 0708
Pathway
naz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
naz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Aazo_0668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
naz03019
]
Aazo_0668
03009 Ribosome biogenesis [BR:
naz03009
]
Aazo_0668
Enzymes [BR:
naz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Aazo_0668
Messenger RNA biogenesis [BR:
naz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Aazo_0668
Ribosome biogenesis [BR:
naz03009
]
Prokaryotic type
rRNA processing factors
Aazo_0668
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
ADI63136
UniProt:
D7E107
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All DBs
Position
complement(704358..706499)
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AA seq
713 aa
AA seq
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MPKQIIIAEQHQIAAVFSEDQIQELVVATGHHQIGDIYLGVVENVLPGIDAAFVNIGDPE
RNGFIHVTDLGPLKLKRSSAAITELLTPQQKVLVQVMKEPTGTKGPRLTGNITLPGRYVV
LMPYGRGVNLSRRIKSESERNRLRALAILIKPAGMGVLVRTEAEGKPEEAIIEDLELLQK
QWEVIQQEAQSTRAPALLNRDDDFIQRVLRDMYGADVNRIVVDSSTGLRRVKQYLQNWSG
GQTPQGVLIDHHRDRSPILEYFRINAAIREALRPRVDLPSGGYIIIEPTEALTVIDVNSG
SFTRSATARETVLWTNCEAATEIARQLRLRNIAGVIVVDFIDMESRRDQLQVLEHFNKSL
KADKARPQIAQLTELGLVELTRKRQGQNIYELFGETCPTCGGLGHTVRLPGEIENRMPIP
AADIQERFTTPISQREPRMPSTRMSEPRESYDAFGEGLEGDAELTPMHLINHPSYQEMGD
NKRRTRTRRSRIGINGANGKDENRLGTPLAFVNDSDLDLDADSDIAPTPEIPSLLSDTRR
ERDVMRTPTLGKAGWTERTERTKVKIDPIKPVVEPPQIVSVEMTVQEQDMFALMGISPSV
KLEQEVKNPKSVIFNIVQPGQTSTSTTESTSTSESISELTVSERTNSELTKVKIPIPKVE
VEELSLEPLIIDPPVQESSTIGFESFTDEEELSSTSSTPNRRRRRRSSAIEEN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacaaattattatcgcagaacagcatcaaatagctgccgttttttcggaagat
caaatccaagaactcgttgttgccactggtcatcatcaaattggtgatatctacttaggt
gtagtagagaatgtgttacctgggatagatgcagcctttgtcaatattggtgatccagaa
cgcaacggttttattcacgtcactgacttgggtccactcaaactcaagcgcagttccgca
gccattactgaattgctcacaccacagcaaaaagtattggtacaagtaatgaaagagcca
acgggaacaaaaggcccgagactcacaggtaacattaccctacctggacgttacgtagtg
ctgatgccctatggcaggggtgttaatttatcccgacgaattaagagtgaaagtgagcgt
aaccgcctccgcgccctagcaattttaattaaaccagcaggtatgggtgtgctggtgcga
acagaggcagaaggtaagccagaagaagcgattattgaagacttagaattgctacaaaag
caatgggaagtcatccaacaggaagcgcaatccacccgcgctccagcattactcaaccgg
gatgatgactttatccagcgcgtattgcgggatatgtatggcgcagatgtaaatcgcatt
gttgttgattccagcactggtttgcgccgagttaagcagtatttacagaactggagtgga
ggtcagacaccacaaggtgtactcattgaccaccaccgcgaccgctccccaattttagaa
tatttccgcattaacgccgccattcgggaagccctaagacccagagtagacctaccttct
ggcggttatattatcattgagccaacggaagcgttaacagttattgatgttaattctggc
tccttcacgcgctccgctacagccagagaaacagttttgtggacaaactgcgaagcagct
acagaaattgcccgacagctgcgtttgcggaacattgccggcgtaattgtcgttgacttc
attgatatggaatcgcggcgcgaccaactacaagttttagaacattttaataaatcgctc
aaagctgataaagctcgtcctcagatagcccaactcactgagctaggtttggtagaacta
acccgcaaacgccaaggtcaaaatatttatgaattgtttggggaaacttgtcccacctgt
ggcggtttaggacataccgtgcgcttaccaggggaaatagaaaaccggatgcctattccc
gcagcagatatacaagagaggtttacaacacccatatctcaaagagaaccacggatgcca
tctactcgcatgtcagaaccacgggaaagctatgatgcatttggggaaggattggaaggt
gacgctgagttaacacctatgcatctgattaaccatcccagttatcaggaaatgggcgat
aacaaacgtcgtacccggacccgtcgtagtcgaattggtatcaatggtgctaatggcaag
gatgaaaaccgcctgggtacgccactggcttttgtgaacgattcagatttagatttagat
gctgacagtgatatagctccaacaccagaaattccctctctgctctccgatacgcgacga
gaaagagatgttatgcgaacacccactctgggtaaagctggatggacagaaagaactgaa
cgcaccaaagtgaaaatcgatcccatcaaaccggtggtagaacctccgcaaattgtttct
gtagaaatgacagtgcaggaacaagatatgtttgctttgatgggaatttctcctagtgta
aaactggagcaagaagtcaaaaatcccaaatctgtgatttttaacattgttcaacctgga
caaacatcaacttccacaacggaatcaacatcaacatcagaatcaatatcagaattaacg
gtttctgaaagaaccaattctgaactgactaaagtcaaaatacccattcccaaagttgag
gtagaagaactatctttagagccattaatcatcgatcctcctgttcaagaatccagcacc
attggatttgagtctttcactgatgaagaggaactaagtagtacttcttctactcctaat
cgccgtcgtcgccgtcgttcttcagcaatagaggaaaactaa
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