'Nostoc azollae' 0708: Aazo_1014
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Entry
Aazo_1014 CDS
T01260
Name
(GenBank) DNA-directed RNA polymerase, beta'' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
naz
'Nostoc azollae' 0708
Pathway
naz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
naz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Aazo_1014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
naz03021
]
Aazo_1014
03400 DNA repair and recombination proteins [BR:
naz03400
]
Aazo_1014
Enzymes [BR:
naz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Aazo_1014
Transcription machinery [BR:
naz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Aazo_1014
DNA repair and recombination proteins [BR:
naz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Aazo_1014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-ProteinID:
ADI63381
UniProt:
D7E2K4
LinkDB
All DBs
Position
complement(1077271..1081398)
Genome browser
AA seq
1375 aa
AA seq
DB search
MTEKMIFRNLVVNKGQLRNLISWAFTHYGTARTAVMADKLKDLGFRYATKAGVSISVDDL
MVPPSKRSLLEAAETEILSTEARFKRGEITEVERFQKVIDTWNSTSESLKDQVVSHFKKT
NPLNSVYMMAFSGARGNISQVRQLVGMRGLMADPQGEIIDLPIKTNFREGLTVTEYIISS
YGARKGLVDTALRTADSGYLTRRLVDVSQDVIIREFDCGTTRGIPLRDMTEGAKVLIPLS
TRLMGRVVAEDVVHPVTGEVIAPRNTPISDDLAAVIGKSGVKEVIARSPLTCEAARSVCQ
HCYGWSLAHAKMVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVAQQVRSKIDGT
VKISRKLKTRPYRTRHGEDALYAETNGTLVLEAKNPGVENQEISITQGSTLYIMPGQQVK
AAQLLAEVALGGRTARANTEKAVKDVASDLAGEVQFADVVAEQKTDRQGNTTTTASRGGL
IWILSGEVYNLPPGAELVVNNGDAIASNGVLAETKLTSVHGGVVRLPEAIPGKATREIEI
ITASVVLDQATVTVQSSQGRNHYLIHTGEGYTEQGRGARNINEEDTSSLSPSSQTFNLRA
TPGTKVQNGQVVAELIDDRYRTTTGGFLKFAGIEVQKKGKAKLGYEVVTGGTLLWIPEET
HEVNKDISLLLVEDGQYVEAGTEVVREIFCQTSGVIEVTQKNDILREVVIKPGELLMVDD
PEAVLGRDNTFVQPGEEFQGTIATELRYIQYIESPEGPALLNRPVIEFDVPNNPDVPSTS
VSQQTGRSIQLRAVQRLPYKDSERVKSVEGVELLRTQLVLEIEQEGEQDHNASPLAADIE
LVPDTENAQVQRLQLVILESLVVRRDITADATQGSTQTTLEVEDGLTIAPGAVVARTQIL
CKDGGVVRGVRKGTEAVRRCLVLRDSDMITISSTAAPKVKKGDLLVEGAEIAPGVFAPES
GQVVEIRRQEAGGRRQEAENSSALITDNSSLITVRVGRPYRVSPGAVLQIEDGDLVQRGD
NLVLLVFERAKTGDIIQGLPRIEELLEARKPKEACILCRRPGEVKVVYGDGDEALISREA
YAIKVLESNGVVTDYPLGPGQNLMIPDSAHVLAGQPLTDGPSNPHEILEIFFSLGSDDGI
YACASHALQKVQSFLVNEVQMVYQSQGIDIADKHIEVIVRQMTNKVRIDDGGDTTMLPGE
LVELRQVEQVNEAMSITGGAKAQYTPVLLGITKASLNTDSFISAASFQETTRVLTEAAIE
GKSDWLRGLKENVIIGRLIPAGTGYNTYDEPSTIEDYGTDLGTGVLDEVDDPLDMVLDDR
TAKLYSLDSPSLVDGSYGGRRGERSILDDDDLIADEVSDLVDDDDDDDDDDDYYE
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaaaatgatttttcgtaaccttgtcgttaacaagggtcaactgagaaactta
atttcctgggcatttacccattatgggacagcgcggacagcggtgatggcggacaaactc
aaagatttgggtttccggtatgccaccaaagccggggtttccatcagtgtggatgacttg
atggtgccaccttccaagcgatcactcctagaggcagcagaaacggaaattctcagcaca
gaagcccggtttaaacggggggaaattacggaggtcgaacgattccagaaggtaattgat
acctggaacagcacctccgaaagcctgaaggatcaggtggtttcacacttcaaaaaaacc
aaccccctcaactctgtgtatatgatggccttttctggcgcacggggtaacatttcccaa
gtccggcaattggtggggatgcggggactaatggcagatcctcaaggggagattattgac
ttaccaattaaaaccaacttccgagaaggattaacagttacagaatatattatttctagt
tatggagccaggaagggactggtggatacggccctgcggactgctgactctggttatctc
acccggcggttggtggatgtatcccaagatgtgattattcgggaatttgactgtggtaca
accagaggcattcctttgcgggatatgaccgaaggggcaaaggtgttgattcccctgtcc
accagattgatggggcgggtagtggcagaagacgtggtgcatccggtgactggagaagtt
attgcaccccgcaacacaccaatttctgatgatttggcagcagtgattggcaaatctgga
gtcaaagaggtgatagcgcgatcgcccctcacctgtgaagcagcccgttctgtttgtcaa
cactgttatggttggagtttagcccacgccaaaatggtagacctgggtgaagcagtgggg
attattgccgcccagagtattggtgaacctggaacccagttgaccatgcgtaccttccac
accgggggagttttcactggggaagttgcccaacaggtgagatccaaaattgacgggaca
gtgaaaatttctcgcaagctgaaaacccgtccctatcgcacccgccacggtgaagatgcc
ctctatgccgaaaccaacggcacattggtattggaagccaaaaatccaggggtggaaaac
caagaaatttctatcacccaaggttcaaccctgtatattatgccagggcaacaggtaaaa
gcggcacagttgttggcagaagtcgccctgggaggcagaaccgccagagccaatacagaa
aaagcggtcaaagacgtggcttccgacttggctggggaagtgcagtttgccgatgtggtg
gcagaacaaaaaaccgaccgtcaaggcaacaccaccactaccgcttccagagggggattg
atttggattttgtctggggaagtgtataacttaccaccaggtgcagaattggtagtgaat
aacggtgatgcgatcgcttctaatggagtcttggcagaaaccaaattaaccagtgtccat
ggtggggtagtgcgtctaccagaagccatacctggcaaagccaccagagaaattgaaatt
atcaccgcctctgtagtcttagaccaagccacagtgacagtccagagttcccaaggacgc
aaccactatttgattcatacaggggaagggtacaccgaacagggaagaggtgccagaaat
atcaatgaagaagatacctcttcactatcaccttcttcccagactttcaacctccgggct
acaccagggacgaaggtccaaaatgggcaggtggtagcggaattgattgatgaccgttat
cgtaccactaccggtgggttcttaaagtttgctggcattgaagtccagaaaaaaggtaag
gctaaattaggctatgaagtagtcactggtggcacactgctgtggattcctgaagaaacc
cacgaagtgaacaaagacatttctttgttgttggtggaagatgggcagtatgtggaagct
gggacagaggtggtgagagagattttctgtcaaaccagcggagtgattgaagttacccag
aaaaacgacatcctcagagaagtggtgattaaaccaggtgaactgctgatggtggatgat
ccagaggcagtattggggagggataacacctttgtccaaccaggagaggaattccaaggc
acaatagccaccgaactgaggtatatccaatacatagagtccccagaaggcccggcatta
ttaaaccgtccggtaattgaatttgatgtacccaacaatcccgatgtgccttcgacttca
gtgagtcaacaaacaggccgttccattcagttgcgagcagtgcagcgtttgccctacaag
gattcggaacgggtcaaatctgtagaaggagtggaactgctgcggacccaactggtgttg
gaaattgagcaggaaggggaacaagaccacaacgcctcacctctggctgcggatattgaa
ctagtcccagatacagaaaatgctcaggttcaaagattgcagttagtaattttggaatct
ttggtagtgcggcgagatatcactgctgatgccacccaaggcagcacccaaacgacattg
gaagtggaagatgggttaacgattgcccctggtgctgtggtggcacggacacagattttg
tgtaaggacggcggtgtagtccgtggtgtccgcaaaggcacagaagcagtgcgacgctgt
ttagtgctgcgcgacagcgacatgattaccatctccagcactgctgcacccaaggttaaa
aaaggcgacctgttagtggaaggtgcagaaattgcccctggtgtatttgcaccagaatca
ggacaggtggtagaaatcaggaggcaggaggcaggaggcagaaggcaggaggcagaaaat
tcttctgcactgataactgataacagttcactgataactgtccgggttggtcgtccctac
cgagtcagtcctggtgcagtgttacaaattgaagatggggacttggtgcaacggggtgac
aacttggtgctgttggtgtttgagcgagccaagacaggagacattattcaaggtctgccc
cggattgaggaactgctggaagctcgtaaacccaaggaagcctgtattttgtgccgtcgt
cctggggaagtaaaggtggtgtatggtgatggtgatgaagcattaatctcacgagaggcc
tatgccataaaagttttggaatccaatggtgtggtgactgactatccccttggtcctgga
caaaacctgatgattcctgatagcgctcatgtcttggctggtcaacccctgactgacgga
ccctccaacccccacgagattttggaaattttctttagtctcggttctgatgatggtatt
tatgcctgtgctagtcatgccttgcagaaggtacaaagctttttggtgaatgaagtgcag
atggtgtatcagtctcaaggcattgacattgctgataagcacattgaggtgattgtgcgg
cagatgaccaacaaagtccgcattgacgatggtggagatacgaccatgttgcctggtgag
ttggtggaattgcgccaagtggaacaggtgaatgaggctatgtccattactggtggtgcc
aaggcgcaatatactcctgtattgttggggattaccaaggcttcgttgaatactgacagc
tttatttctgcggcttctttccaagaaactaccagggtgctgacggaagcagccattgag
ggtaagtctgattggctgcggggtttgaaagaaaacgtgatcattgggcggttgattcct
gctggtacaggttacaacacctatgatgaacccagcaccattgaggactatggtactgat
ttgggtactggggttttggatgaggttgatgacccgttggatatggtgctggatgaccgc
actgctaaactttatagcttagatagtcctagtttggtagatggtagctatggaggtaga
cggggagaaaggtcaattttggatgatgatgatttgattgctgatgaggtcagtgacctt
gtagatgatgatgatgatgatgatgatgatgatgattactatgaataa
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integrated database retrieval system
