'Nostoc azollae' 0708: Aazo_1480
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Entry
Aazo_1480 CDS
T01260
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
naz
'Nostoc azollae' 0708
Brite
KEGG Orthology (KO) [BR:
naz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
naz03021
]
Aazo_1480
Transcription machinery [BR:
naz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Aazo_1480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HNH_repeat
DUF1940
CM_1
Motif
Other DBs
NCBI-ProteinID:
ADI63693
UniProt:
D7E4D5
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All DBs
Position
1550512..1551495
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AA seq
327 aa
AA seq
DB search
MPTVNTQTENLNTKFTADMVRTYLREIGRVPLLTREQEIVYGKQVQQMMTLLDAKEVLAK
KLDHEPSLPEWAAHVNQSETEVKQTVAQGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGTLGLERGVEKFDPMRGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKI
KKVQRELAQKLGRSPSPTEIAKELELEPAQIREYLNMARQPVSLDVRVGDNQDTELQEML
EDEGPSPEYYTTQEFLRQDLNNLLAELTPQQREVLALRFGLEDGNEMSLAKVGERLNLSR
ERVRQLEHQALAHLRRRRANVKEYVAS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgttaacacgcaaactgaaaacctgaataccaaattcacggctgatatggtg
cgaacctatctgcgagaaattggtcgtgtaccactgctaacccgtgaacaagagattgtg
tatgggaagcaagtgcagcaaatgatgacgctgctggacgctaaagaagttttggcaaaa
aaactagaccatgaacctagtttaccagaatgggctgcccatgttaaccaatcggaaacc
gaagttaagcagacggtagcacaaggtaagcgagccaagcagaaaatgattgaagcgaat
ttgcgcttggttgtagctattgctaaaaagtatcaaaagcgaaatatggaatttctggat
ttaatccaggaaggaactttgggattagaaagaggtgtggagaaatttgatcccatgcgg
ggttataagttctcgacctatgcttactggtggattcgtcaagcgattacgagagcgatc
gcccaacaaggtcgaaccatccgcttacccatccatattaccgaaaagctgaacaaaatt
aaaaaagtgcaacgtgagttggcgcaaaagttgggaaggtctccttcacctacagaaatc
gccaaagaactagaattagaacctgctcagattcgtgaatatctgaacatggcgcgtcaa
ccagtatctttagatgtgcgagttggtgataatcaagataccgaactccaagaaatgctg
gaagatgaagggccatcaccagagtattacacaactcaggaattcttgcgccaagacttg
aataacctgttagcagaactaacaccccaacagcgtgaagttttagcattgcgctttgga
ttagaagatggtaatgaaatgtccttagcgaaagttggtgaacgcttaaacctcagccgt
gagcgagtccgtcaactggagcatcaagctcttgctcatttacgtcgccgtcgcgccaat
gttaaagaatacgttgccagctaa
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