'Nostoc azollae' 0708: Aazo_1897
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Entry
Aazo_1897 CDS
T01260
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
naz
'Nostoc azollae' 0708
Brite
KEGG Orthology (KO) [BR:
naz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
naz03021
]
Aazo_1897
Transcription machinery [BR:
naz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Aazo_1897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
HTH_24
HTH_3
HTH_23
Sigma70_ECF
KORA
HTH_Tnp_ISL3
HTH_8
HTH_Tnp_4
GerE
MarR_2
HTH_17
Xre-like-HTH
HTH_28
HTH_11
HTH_31
HTH_30
HTH_AsnC-type
DUF1492
Sigma54_DBD
HTH_37
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ADI63989
UniProt:
D7DVY0
LinkDB
All DBs
Position
complement(1968940..1969737)
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AA seq
265 aa
AA seq
DB search
MLNPQCAMPTTATNELKHEISQLLREYQQCPSERLRNQLVKVNFGLVRKEAHYWINQCQE
SYDDLIQVGCLGLIRAIEKFELSKGNAFSSYAIPYIRGEIQHYLRDKGVTMRIPRRWLAL
QQQAIGLSRSLREKYNRQPTDAELAAVLAISLSEWEEIKLAWMNRSPLSLDVPIKDGEEG
ASCLGELVPDPHYRSFQLAQEDQIRLQQALVQLENRTREVLECVFLQDLTQKQVAEHLGI
SVVTVSRRVKKGLDLLKYLMGVAED
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccccaatgtgccatgcctactacagccacgaacgaactcaaacatgagatt
tcccaattattgcgagagtatcagcaatgtccctcagaacgtctccgcaatcaattagtg
aaagtaaattttggactagtgagaaaagaagctcattactggattaatcaatgccaagaa
agctacgatgatttgatccaggtcggctgtttgggcttgattagagctattgaaaaattt
gaactttctaaaggaaatgcttttagttcttacgccattccttatattcgtggagaaatt
caacattacctccgagataaaggcgtgactatgcgaatccccagacgatggttggcactg
caacaacaagcaataggactgtcccgttctttacgcgaaaaatataaccgccaacctact
gatgcggaattagcagcagtattggcaatttccctgagtgaatgggaggaaattaaatta
gcatggatgaatcgctcccccttgagtcttgatgtacccataaaagatggagaagaaggt
gcttcctgtttgggtgaactagttccagatcctcattaccgcagttttcaactggctcaa
gaagaccaaattcgtctacaacaagcattggtacagctggaaaatcgtacccgcgaagtt
ttagagtgtgtatttttgcaagatttgacacagaagcaagttgcagaacatttgggcatt
agtgtagttactgtgtctcgtagagtcaaaaaaggactggatttgttgaaatatcttatg
ggtgtagcagaagattaa
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