'Nostoc azollae' 0708: Aazo_2917
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Entry
Aazo_2917 CDS
T01260
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
naz
'Nostoc azollae' 0708
Pathway
naz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
naz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Aazo_2917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
naz03019
]
Aazo_2917
Messenger RNA biogenesis [BR:
naz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Aazo_2917
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
RNase_J_C
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ADI64740
UniProt:
D7E163
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Position
complement(3006047..3007822)
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AA seq
591 aa
AA seq
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MAKNELDSTLKIIPLGGLHEIGKNTCVFEYEDEIILLDAGLAFPTEAMHGVNIVLPDTTY
LRENRHKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMAMLEGKLEEAGVRDHTE
LRTVMPRDIVRIGKAFFVEYIRNTHSIADSFTVAIHTPLGVVIHTGDFKIDHTPVDGEKF
DLQRLAEHGEKGVLCLLSDSTNSEVPGFTPSERSVFPNLDRVFSQATGRLFVTTFASSVH
RINMILQLAKKHNRVVTVVGRSMLNLIAHARNLGYIKCEDNLFQPLHTVRGMPDENVLIL
TTGSQGETMAAMTRIANKEHPHIKIWEGDTVVFSANPIPGNTIAVVNTIDKLMMQGAKVV
YGRDKGIHVSGHGCQEEQKLMIALTRPKFFVPFHGEHRMLVKHAETAQSMGIPAENMIII
QNGDVIELTEESIRVAGKVSSGIELVDTTSSGMVSAKVLQERQRMASEGLVTIAAAIDWN
GKLLAKPEIHMQGVVTSIDRALLLKWVQQRIEEILTVRWSEFVTGNEANDIDWGGLQVML
EKELQRSLRRELQCQPCLTLLMQIPEEPPVSVKAAADGRRRRTRPTAQVAS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaacgaacttgattccaccctcaaaattattcctttgggtggcttgcatgaa
attggtaagaatacctgtgttttcgagtacgaggacgaaataatcctgttagatgcaggt
ttggcttttcccacagaggcgatgcacggcgttaatattgtgttacctgatacaacatat
ctcagagaaaatcgccataaaattaaaggaatgattgttactcatggtcatgaagatcat
attggtgggattgcttttcacctgaaacaatttgacatccccgtaatttatggacccaga
ctagcaatggcaatgctagagggtaaattagaagaagcaggagtgcgggatcacaccgaa
ttaagaactgttatgcctcgcgatatagtccgcattggtaaagccttttttgtcgaatac
atccgcaacacccactccatagctgatagtttcaccgttgctattcataccccattaggt
gtagttatccatacaggcgattttaaaattgaccataccccggtcgatggagaaaagttt
gatctgcaacggttagcagaacatggagaaaaaggcgtactgtgtctactaagtgactct
actaattcagaagtgcctggttttacaccatcagaacgttctgttttccccaacctggat
cgagtattttctcaagctactgggcgcttatttgtcaccacctttgcttccagcgtacat
cgcatcaacatgattttgcaactggcaaagaaacacaatcgtgtagttacagttgtggga
cgttcaatgctgaatttaattgcccacgcccggaacttaggttatatcaagtgcgaagat
aatctattccaacccttacatactgtccgtgggatgccagatgaaaatgtgttgattctg
accactggctcccagggtgaaacaatggcagctatgaccaggattgctaataaagaacac
ccgcacattaaaatttgggaaggtgacacagttgtattctctgctaaccccattccagga
aatacaattgccgtagttaacaccattgacaaattgatgatgcaaggggcaaaagtagtc
tatggaagggataaaggtattcacgtttctggccacggctgtcaagaagagcaaaagcta
atgattgctttaactcgtcctaagttctttgtacctttccacggtgaacatcggatgttg
gtgaagcacgcagaaaccgctcagagtatgggtatacctgctgaaaatatgattattatc
cagaatggagatgtgatcgaactcacggaagaatctatccgtgttgctggtaaagtatca
tcaggaattgaactggtggatactactagttctgggatggtgagtgcaaaagtcttgcaa
gaacgacaacgcatggcttctgaaggacttgtgaccattgctgctgccattgattggaat
ggtaaactgttggcgaaaccagaaattcatatgcaaggtgtggtgacaagtattgatcga
gcacttttactaaaatgggtacaacaacgcattgaagagattctaaccgtgcgttggtca
gaatttgtcaccggaaacgaagcaaatgatattgattggggtggtttgcaagtaatgtta
gaaaaagaattgcagcgttctcttcgtcgggagttacaatgtcaaccatgtttaactttg
ttgatgcaaattcctgaagaaccacctgtttccgtaaaagctgctgctgatggcagaaga
cgacggactcgtccaacagcgcaagtagcttcttaa
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