'Nostoc azollae' 0708: Aazo_4314
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Entry
Aazo_4314 CDS
T01260
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
naz
'Nostoc azollae' 0708
Pathway
naz03420
Nucleotide excision repair
naz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
naz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aazo_4314
03430 Mismatch repair
Aazo_4314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naz03400
]
Aazo_4314
Enzymes [BR:
naz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aazo_4314
DNA repair and recombination proteins [BR:
naz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aazo_4314
MMR (mismatch excision repair)
Other MMR factors
Aazo_4314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
AAA_12
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
ADI65668
UniProt:
D7DWK5
LinkDB
All DBs
Position
complement(4386384..4388741)
Genome browser
AA seq
785 aa
AA seq
DB search
MSKDNFMVIVNQESLEIEDIQPSPAAKLRKNIDKIRHSLRPGQKQMANWESGPLAVSAVP
GAGKSTGMAAAAAIAIARQYQYSLTTGNNYRRQLVVVTFTRSAAANLKLKIRDKLKKLSL
PQTGFAVYTLHGLALNIANRYPDLSGLQLENVTLITPNQTHRFIRAAVEQWITKNPELYR
RLLEGQKFDGEETEKLRRQSVLRTEVLPDLAYTVIHEAKSSGILPEKLYKWSERTQDTYQ
ILQVAAGLYEQYQKLMASQDFIDYDDMMLAALRVLENSSARRIEQNQIFAIFEDEAQDSS
PLQTQLLEILAGEEDGNNADQSTLNLVRVGDPNQAINSTFTPADPIYFREFCKNCDINQR
LATMNQAGRSSKIIIDAANFALEWVNSQWSTITKNGQTPFLSQKIAAVNMGEPQLNANPA
PFGKGLELYSPRDIHHTVELLSQKVIELFTQNSDSRAAVLVRENRQGRWLTSALEAICQE
HQIKLYDVGEMERRSHVPQEILSLLQFCDRPHSSDYLKATLQVLVQRQLIPIQDINSLAS
IPEQFLYPGPLATPQTEIVRKAAHLCRSLLHARLELPIYQIIPFLALTLNYDQAELATAD
KLAERVNLQNWGNNSMGSMLSALSEIVNSERFEPVDTENSEEQYTKKGQLTITTMHKAKG
LDWDYVFLPFLHENLIPGKFWVPPQSQFLGDFTLSEVARAQIRAGLHQQTETIPNVSQAW
EQAKYLKMAEEYRLLYVAMTRAKRLLWMSAAHQAPFTWSKPDSLQASAPCPVFAALERQF
SSYTN
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagataattttatggttatagtcaatcaagaaagcctggaaatagaagatatt
cagccatcaccagcagctaagttacgaaaaaatattgacaaaattcgtcatagtctgcga
cctggacaaaagcaaatggctaattgggaatcgggtccattggctgtatctgctgtgcct
ggtgctggtaaatctacaggaatggcagcagcagcagccatagcaatagctcgccagtat
cagtattccctcaccacaggtaataattatcggcgtcagttagtagttgtcacctttacc
cgttctgctgctgctaacctaaaattaaaaatccgcgataaacttaagaaactatcctta
ccacaaacaggctttgctgtttataccctccacggtttagccttaaatatagccaatcgt
tatcctgatttatccgggttgcagttagaaaacgtcacattaatcacccctaatcaaact
catcgcttcatccgcgcagccgtagaacaatggattacaaaaaatcctgaactttatcga
cgcttactagaaggtcaaaaatttgatggtgaagaaacagaaaaactacgtcgtcagtct
gtgctacgcacagaagtattaccagacttagcttatacggtcattcacgaagctaaaagt
tcgggaatattaccggaaaaactctataaatggagtgaaagaacccaagatacctatcaa
attttacaagtggcagcgggattgtatgaacaatatcaaaaattaatggcttcccaagat
ttcattgactacgatgatatgatgttagccgctttacgcgtcttagaaaattctagcgcc
agacggattgaacaaaatcaaattttcgcaatttttgaagatgaagcccaagattctagc
ccactacaaacgcagcttttagaaatactagctggtgaagaagacggcaataatgcagat
cagtcaacactcaatttagtcagagttggtgatcctaatcaggcgattaattcaactttt
acacctgctgatccgatttattttcgggagttttgtaagaattgtgatattaatcaacga
ctagcaacaatgaatcaagctggtcgtagtagcaaaattattattgatgcagccaacttt
gcattggagtgggtaaatagtcaatggtcaaccataactaagaacggacaaacaccattt
ctctcccagaaaattgcggctgttaatatgggtgaaccccaactaaatgctaatcctgca
ccatttggtaaaggtctggaattgtatagccctcgtgatattcatcatacagttgagttg
ctttcccagaaagtaattgaattatttactcaaaactctgattcccgtgcggcggtatta
gtcagggaaaatcgtcaagggagatggttaacatcggctttagaagctatttgtcaagaa
catcaaattaaactttatgatgtgggagaaatggaaagacgttctcatgttccacaagaa
attttatcattattgcaattttgcgatcgcccgcattcctctgattatttaaaagccact
ctccaggttttagtacaacgtcaattaattcccatccaagacattaactccctagccagt
atcccagaacaatttttatatcctggacccctagccactcctcaaacagaaatagttcga
aaagctgctcatttgtgtcgcagtttacttcatgcccgtttagaactacccatatatcaa
attattccgtttttagccttaaccttaaattacgaccaagcggagttagccaccgctgac
aaacttgcagaacgggtaaacctgcaaaattggggtaataattctatgggttcaatgctg
tcggctttaagtgaaatcgtcaattctgaacgctttgaaccagtagatacagaaaattca
gaagaacaatataccaaaaagggacaattaacaattaccactatgcacaaagcgaaaggg
ttggactgggattatgttttcctaccgtttttgcatgaaaacttaattcctggtaaattt
tgggttcctccccaaagccaatttctaggcgattttaccttatcagaagtagcacgcgcc
caaattcgcgccggacttcatcaacaaacagaaactatacccaatgtaagccaagcttgg
gaacaagccaaataccttaaaatggccgaagaataccgtttattgtatgttgctatgacc
agggcaaaaagacttttatggatgtctgcggcgcatcaagcaccatttacttggagtaaa
cctgatagtttacaagcttcagccccttgtccggtatttgccgctctagagcggcaattc
tccagctatacgaattga
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