Aquella oligotrophica: CUN60_00940
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Entry
CUN60_00940 CDS
T05482
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
nba
Aquella oligotrophica
Pathway
nba03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CUN60_00940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nba03400
]
CUN60_00940
DNA repair and recombination proteins [BR:
nba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUN60_00940
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CUN60_00940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
Kinesin
AAA_30
DUF87
TP_0855_C
Motif
Other DBs
NCBI-ProteinID:
AUR50926
UniProt:
A0A2I7N391
LinkDB
All DBs
Position
197700..199703
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AA seq
667 aa
AA seq
DB search
MKIIQYPGSSFRLHQPFPPAGDQPTAISGLVEGLKDGLQYQTLLGVTGSGKTYTMANIIA
ETGRPALIMVHNKTLAAQLYAEFRDFFPENAVEYFVSYYDYYQPEAYVPHKDLFIEKDSS
INEHIEQMRLSATKSLLERDDTIIVATVSAIYGIGDEAAYRQMILHLKEGNTLTQQEIIK
QLVNMQYQREDIEFKRGTFRIRGDTIDVFPAEYYDKAIRISLFDDEIDGLFLFDPLTGKI
EQRIGRFTVFPSSHYVTPRETIMSATETIKVELEKRIREYEANGKTIEAYRIKQRTEFDL
EMLTEIGFCKGIENYSRHLTGRAPGEPPPTLIDYLPANSILFVDESHVTISQIGGMYNGD
RARKQNLVDYGFRLPSAMDNRPLRFEEFEQRMPQTIMVSATPGKYEAEHQDNLVEQVVRP
TGLLDPIIEVRPVEFQVDDLLHEIKIRKELNQRVLVTTLTKKMSEKLSEYYAENGIRVRY
LHSDIDTVERVEIIRDLRLGVFDVLVGVNLLREGLDMPEVSLVAIFDADKEGFLRSERSL
IQTVGRAARNSEGRAIFYADKITKAMQVALDETKRRREKQLSHNEKFGITPLTVVKPIND
IIDGVYREEKKQKFEIKLPKGLSDKELTKLVKQVEKRMKEHSMNLEFEEAAKCRDELKVL
KELLFKN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattattcaatatcccggtagttcatttcgactccaccaaccatttcctccagca
ggagatcagccaactgcaattagtgggctagtcgaaggcctaaaagatggtttacaatac
caaaccttacttggtgtaactggtagtggaaaaacctataccatggcaaatataatcgcg
gaaactggtcgtccagcattaatcatggtgcataataaaacattggcagcacagctttat
gccgaatttcgtgatttcttcccagaaaatgcggttgaatattttgtctcttattatgat
tactatcagccagaagcttatgttccacataaggatctatttattgaaaaagattcttca
atcaatgaacatatcgaacagatgcgtttgtcggcaactaaatcacttcttgagcgcgat
gatacaataatcgttgcaacggtttcagcaatttacgggattggtgatgaggcagcttat
cggcaaatgattctgcatctgaaagagggtaatacgctaactcagcaggaaataatcaaa
cagctagtaaatatgcaataccagcgtgaagatattgaatttaaacggggtacattccgt
attcgtggtgataccattgatgtattcccggctgagtattatgataaagcaattagaatt
agcctttttgatgatgaaattgacggattatttctctttgatccattaactggcaagatt
gagcaaagaatcggcagatttacggtattcccatcttcacactacgtcacgccccgtgaa
acaatcatgtctgctaccgagacaatcaaagttgaactagaaaaaagaatccgtgagtat
gaagcgaatggcaaaactatcgaagcatatcgaataaaacagcgcacagagtttgatctg
gaaatgctaactgagattggattttgtaaaggaattgaaaactattcccgccatctaact
ggacgtgcacccggcgaaccaccaccgacattgattgattatttgccggctaattcaatt
ttgtttgtcgatgaatcacatgttacaatttcgcaaatcggtgggatgtataatggtgat
cgggcacgtaagcaaaatctggtagactatggcttcaggctcccttctgcaatggataat
cgtccacttcgctttgaagagtttgagcaaagaatgccacaaaccataatggtatcagcg
acaccaggtaaatatgaagcagagcatcaggataatctggttgaacaggtagttcgccca
accgggcttcttgatccgattattgaagttcgtccagttgaatttcaggttgatgatcta
cttcatgaaattaaaattcgcaaagaacttaatcagcgtgtcttagttactacgcttacc
aagaaaatgtctgaaaaactaagtgaatactatgctgaaaatggcattcgggttcgttac
ctgcattcagatattgatactgttgaacgagtcgaaattatccgcgatttacgcttaggt
gtttttgatgtgttagtcggagtaaatctactgcgtgaagggcttgatatgccagaagta
agtctggtggcaatctttgatgcggataaagaaggcttcttgcgttctgagcgttcatta
atccaaactgtcggacgggctgctagaaatagtgaggggcgtgcgatattttatgcagat
aaaattaccaaagcaatgcaagttgcgcttgatgaaacaaaacgccggcgtgaaaaacag
cttagtcataatgagaaatttggaattactccattaacagtagtcaaaccaattaatgat
attattgatggcgtgtatcgtgaagagaaaaagcagaagtttgaaatcaaattaccaaaa
ggtttaagcgataaagaattgactaagctggtaaaacaggtagaaaaacgcatgaaagaa
cactctatgaatctggagtttgaagaagcggcaaaatgtcgcgatgaattgaaagtatta
aaagaactattatttaagaactag
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