Aquella oligotrophica: CUN60_02890
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Entry
CUN60_02890 CDS
T05482
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nba
Aquella oligotrophica
Pathway
nba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUN60_02890 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nba03019
]
CUN60_02890 (recQ)
03400 DNA repair and recombination proteins [BR:
nba03400
]
CUN60_02890 (recQ)
Enzymes [BR:
nba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CUN60_02890 (recQ)
Messenger RNA biogenesis [BR:
nba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CUN60_02890 (recQ)
DNA repair and recombination proteins [BR:
nba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CUN60_02890 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AUR51289
UniProt:
A0A2I7N490
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All DBs
Position
635101..636885
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AA seq
594 aa
AA seq
DB search
MIFTDNSPLTVLNQLYGYPAFVGEQEKIITHVLNGGSGLVLMPTGGGKSLCYQIPALLVP
GITIVVSPLIALMQDQVATLDELGVSAIYFSSVLDEETNYESIRKIKAGLVKLVYITPEK
LCNQWFINFIMTLKISLFAIDEAHCVSHWGHDFRPEYQRLSVLKQHFPKVPRLALTATAD
YYTRIDIIHFLGLKDAPVFATSFNRSNIYYSTLEKNNGKGQLLSFIGKNKSGCGIVYCNS
RKRVDELTEFLNSNGINAINYHAGLASDVRNKNQTEFLQSSTSVMVATVAFGLGIDKPDV
RYVYHFDMPRSIDHFYQESGRAGRDSMAAISVVNYGFKEIYELSQMVLNSEVSDLKKRYE
LDKLKRMIAYCDSLVCRRQVLLDALGEKSDPCGNCDLCLNSPNLVDASVIAQKIMSAIYR
MQQRFGVTQVIDVLRGRATATVQVWEHHKLSTFGIASEYTEKELRRIIRQLYSQGLLDID
FNTGALKVNAKSIPVMRGLEQVWIKATALKVAPEFKQLTWLRTEQEERLYHNLISWRHQM
AVRHKVSHHAILSDRTLREIIEQKPQDEIQLKDIYGIGTTKLRRFGNEILTILN
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgatttttactgataattccccactaactgtacttaatcagctctatggttatcccgca
tttgtcggtgagcaagaaaaaatcatcacccatgttcttaatggtggtagtggactagta
ttgatgccaactggcggaggtaaatcgctttgttatcagatcccagctttacttgtgccg
ggtattacgattgtagtttcaccattaattgcactcatgcaagatcaggttgccaccctt
gatgaattaggtgtgtctgcaatttatttttcatcggttcttgatgaagaaacaaattac
gaaagtataaggaaaattaaggcagggttagttaagttagtttatattaccccggaaaag
ctgtgtaatcagtggtttattaattttataatgacccttaaaatttccttgtttgcgatt
gatgaagcacattgtgtttctcattggggacatgattttagaccggaatatcagcgacta
tcggttctaaaacagcatttcccaaaagtccctcgtttggcgctcactgctaccgcagat
tactataccagaattgatattattcattttcttggtttaaaagatgccccagtttttgca
acctcatttaatcgttcaaatatttattattcaactcttgagaaaaataatggcaaggga
cagttgctaagctttattggcaaaaataagagtggctgtggaatagtttactgtaattca
agaaaacgggttgatgaattaactgagtttctaaattcaaatggtataaatgcaattaac
tatcacgccggacttgccagtgatgtccggaataaaaatcagactgaatttttgcaaagt
tctacctcggtgatggttgccacggttgcatttggcttgggaatagataagcctgatgtg
cgttatgtttatcattttgatatgccaaggagtatcgaccatttttatcaagagtcaggg
cgagcggggcgtgattcgatggctgcgattagtgtggttaattatggtttcaaagaaatc
tatgagttatcccaaatggtacttaatagtgaagttagcgatctaaaaaaaagatatgag
ttagataaattaaaacgaatgattgcttattgcgatagtctagtttgtcggcgacaggta
cttttggatgcccttggtgagaaatcagatccttgtggcaattgtgatttatgtcttaac
tctcccaatcttgttgatgcttcagttattgcccaaaaaattatgtcagctatttatcgg
atgcagcagcgttttggggtaactcaagtaattgatgtattgcgtgggcgagctactgct
actgttcaggtttgggagcatcataagctttcaacttttggaatagcctctgaatatacc
gaaaaggagttacgtcggattatcaggcagctttacagtcaagggttactggatattgat
tttaatactggagcactgaaagtaaatgccaaatcaattcctgtaatgcgtggtttggag
caagtctggataaaagccaccgctttaaaagttgctcctgaatttaagcaattaacttgg
ctacgtaccgagcaggaagagcggctgtaccataatttgattagttggcgtcatcagatg
gctgttcgtcataaggtgtcgcatcatgcaattttatcagatcgaacactaagagagatc
atagaacaaaagccacaagacgagattcagttaaaagatatttatggaataggtacaacc
aaactccgtcggtttggcaatgaaattttaaccattttaaactaa
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