Aquella oligotrophica: CUN60_07900
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Entry
CUN60_07900 CDS
T05482
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nba
Aquella oligotrophica
Pathway
nba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUN60_07900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nba03019
]
CUN60_07900
Enzymes [BR:
nba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CUN60_07900
Messenger RNA biogenesis [BR:
nba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CUN60_07900
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
AAA_22
HI1480
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AUR52220
UniProt:
A0A2I7N707
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All DBs
Position
1714087..1715433
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AA seq
448 aa
AA seq
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MSFSELGLSDSILDALSERGYTKPTKIQTEAIPAILAGNDVLASAQTGSGKTAGFTLPIL
QLLADKSVKGPSSGRPPIRALILVPTRELAAQVEESVNIYGKNLTLTSMIMIGGVSLNPQ
IKRLRSRVDILIATPGRLLDHIAQKNVDLSQIKILVLDEADRMLDMGFIRDIKKILALLP
QTRQSLLFSATFSKEIKSLAESFLNKPVLIETEKSNSTVPLINHKVHFVNADKKKFLLAH
LIKEKNWFQVLVFTKTKHGANKLAEFLTNQGISALAIHGNKSQSVRTRTLAEFKQGSLQI
MVATDIAARGIDIVDLPHVVNFDLPNVPEDYVHRIGRTGRAGKTGDAVSLVSQDDRKLLN
SIERLIGMKIPEELVSGFEVTANTMQKDSPQKPRTQQKKDKPIANQKDKGLIKQKTIKTE
PLAKPQKINKKQEVTVLLTKPIKKTRSK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttcggaattaggtttgtctgattcaatactagatgcacttagcgaacgaggt
tatacaaagcctactaaaattcagactgaagccattcctgccattctagctggcaacgac
gttttggcaagtgcgcaaactggcagtggtaaaactgctggctttacattaccaatttta
caactacttgcagataaatctgtcaaaggaccatcctctggacgtcctccgataagagcc
ctgattttagtaccaactcgggaattagcggctcaagtagaagaaagtgttaacatttac
ggtaaaaatctgactttaacttcaatgattatgattggtggtgtaagcttaaatccacaa
attaaacgcttacgtagtagggttgatattctaatagcaactccaggcaggctgcttgat
catatagctcaaaaaaatgtagatttatctcaaattaaaatattagtattggatgaagct
gaccgaatgcttgatatgggctttatccgcgatatcaagaaaattctagcattattgcca
caaacccgtcaaagtctgcttttttcggcaactttctctaaggaaattaaatctctagca
gaaagctttttaaataaaccagtattaattgaaacagaaaaaagtaacagtactgttcca
ttaataaatcataaagtgcatttcgtcaatgcggacaagaaaaaatttctgcttgcccac
ctaataaaagagaaaaactggtttcaggttttagtgtttaccaaaaccaaacacggtgcc
aataaactggctgaatttctgactaatcaaggtatttccgctttagctattcatggcaat
aaaagccagtcggtaagaactagaacactagcagaatttaaacaaggctcactgcaaata
atggttgcaactgatattgctgcgagggggatagatattgtagatttaccacatgtggtt
aattttgatttaccaaatgttccagaagattatgtacacagaattggacgtactggtcgt
gcaggtaaaactggtgatgcagtatccctagtatctcaggatgacagaaaattattgaac
tcaattgagcggttaattggcatgaaaattcctgaagaattagttagtggatttgaagta
acagccaatactatgcaaaaagactctccgcaaaaaccgcgaacacagcaaaaaaaggat
aaaccaatagcaaatcagaaagataaaggtttaataaagcaaaaaacaataaaaaccgaa
ccgctagcaaaacctcaaaaaatcaacaaaaaacaagaagttaccgtattattaactaag
ccaatcaaaaaaaccagatcaaaataa
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