Aquella oligotrophica: CUN60_10195
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Entry
CUN60_10195 CDS
T05482
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nba
Aquella oligotrophica
Pathway
nba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CUN60_10195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nba03400
]
CUN60_10195
Enzymes [BR:
nba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CUN60_10195
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CUN60_10195
DNA repair and recombination proteins [BR:
nba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CUN60_10195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AUR52650
UniProt:
A0A2I7N883
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All DBs
Position
2236999..2237808
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AA seq
269 aa
AA seq
DB search
MPELPEVETIKNGLIELTGTSVKKTVIRFPRLRYPLNKNELSKMEGQKVQSVERRAKYLL
LVLEKGTLIIHLGMSGRITLYRDKTPEVQKHDHVDIQFNGYVLRYNDPRRFGCIVYTEKV
NDSTLLVNLGPEPFNDEFNPRYLKNKIANRKTPIKQLIMDNAIVVGVGNIYACESLFMTK
ISPLKPGNNLTLTQCADLVKNIQTVLQNAINAGGSSLRDYKNANGDLGYFQISHYVYGRA
NLPCKICNTPIREVRLGQRNSFFCPECQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactcccagaagttgaaacgattaaaaatggacttattgagctaactggaaca
tctgtaaaaaaaactgttattcgcttccccagattacgttatccattaaataaaaacgaa
ttatcaaaaatggaggggcaaaaagttcaatctgttgaacgacgggcaaaatatctcttg
ctagtgctcgaaaaaggcacattaatcattcacttgggaatgtcagggcgaataacatta
taccgggataaaacacctgaagtacaaaaacatgatcacgtggatatccagtttaacggt
tatgtcctaagatataatgatccacgtagatttggctgtatagtttacacagaaaaagtt
aatgattcgacactcttagtaaatctaggtccagaaccctttaatgatgaattcaaccca
cgatacctaaaaaacaaaatagcaaaccggaaaacaccgattaaacaattaataatggat
aatgcaatcgttgttggggttggaaacatttatgcttgtgaatctctttttatgacaaaa
attagcccgttaaagcccgggaataaccttactcttacacaatgtgctgatttggtaaaa
aatattcaaacagttttacaaaacgcaattaatgcaggaggtagctctttacgcgactat
aaaaatgccaatggcgaccttggttattttcaaataagtcattatgtttatggacgggca
aatctgccgtgtaagatttgtaataccccaataagagaagttcgcctcggtcagagaaat
agctttttttgcccggaatgtcagaaatga
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