Aquella oligotrophica: CUN60_12100
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Entry
CUN60_12100 CDS
T05482
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nba
Aquella oligotrophica
Pathway
nba03420
Nucleotide excision repair
nba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CUN60_12100
03430 Mismatch repair
CUN60_12100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nba03400
]
CUN60_12100
Enzymes [BR:
nba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CUN60_12100
DNA repair and recombination proteins [BR:
nba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUN60_12100
MMR (mismatch excision repair)
Other MMR factors
CUN60_12100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
PcrA_UvrD_tudor
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AUR53001
UniProt:
A0A2I7N990
LinkDB
All DBs
Position
complement(2646651..2648855)
Genome browser
AA seq
734 aa
AA seq
DB search
MNEQSLLNNLNDAQLQAVTYTSGSLLVLAGAGSGKTKVLTTRIAWLIKNAQIGVSEVLAV
TFTNKAAKEMLHRIGSILHIDTKYMWVGTFHSIALRLLRLHYQEAGLPSGFQILDSQDQQ
SLIKRLIKHNNIDEDRYPAKEVQGFINYQKEQGIRASELSPDNLKNKILIDLYLLYEENC
NRDGLVDFTELLLRSYELLSMNLPLLNRYRQQFKHILVDEFQDTNVLQYKWLHQLVGERT
MIFAVGDDDQSIYSFRGAKVANMHAFLRDFQVTEPIRLEQNYRSTQVILDAANAVIDNNS
ERIGKKLWTENRHDEKIRLYEGYTEEDEAYYVIDEIRQLHNAGIELNEIAILYRSNAQSR
VFEQHLYNRGIAYRVYGGLRFFDRQEIKRVLAYLRLIINPSDNEAFLRVVNFPARGIGPR
TIEQLQETATQLKRSLFDTVDELTGKLKVSLSKFTDLIRLMQIESKVLNLAETISYVIET
SGIREHYENDPKEGEERIENLNELISAVTGFQAEDTTNPLVEFLAHAVLESGDNQANSYD
SAVQLMTVHAAKGLEFKVVFVVGLEDGLFPHENCLNNLKEVEEERRLMYVAITRAKEKLY
LMRACSRLMWGKRLAAPISRFVNEIPAELIKNISGVSKIGYSELSGYYDPAESNYSGMRN
SRAEFEHPETKTSRVSLKDSDVTLKIGDMIKHAKFGNGKILRLNADGKKMTAEIFFIGIG
KKTLDLNIANIEKV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacagtctttactaaataatctaaatgatgcgcaacttcaagctgttacttat
accagtggctctttgcttgtccttgctggtgctgggagtggtaaaactaaagtccttaca
acccgtattgcatggttaataaaaaatgctcagattggggttagtgaagttcttgcggtg
acgtttaccaataaagccgctaaagaaatgcttcatcgaatcggaagtatacttcatatt
gataccaaatacatgtgggtaggtacttttcattcaatcgcactacgactattgcgcctt
cattatcaggaagctggattgccaagcggatttcagattttggattcccaagatcaacag
tcattgattaagcgcttaatcaagcacaataatattgatgaagatcgttatccggcaaaa
gaagtacagggttttatcaattaccaaaaagagcaggggatccgtgctagtgagctttct
cctgataatttgaaaaacaagattctgatagatttgtatcttttatatgaagaaaattgt
aatcgcgatggtttagttgattttaccgagttattactcaggagttatgagttattaagc
atgaatctaccgttattaaaccgctatcggcagcagtttaagcatatcttggttgatgag
tttcaggataccaatgttttacagtataaatggcttcatcagctagtcggtgaaaggact
atgatttttgcggttggtgatgatgatcaatcaatatactcatttcgtggtgccaaagtt
gccaatatgcatgcttttttacgtgattttcaggtaactgagccaatcagacttgagcaa
aattatcgttctacccaagtaattcttgatgctgccaatgcggttattgataataactct
gagcggattggtaagaagctttggacggaaaatcgtcatgatgaaaaaattcgcctttat
gaaggatatactgaagaggatgaggcttattatgtgattgatgagattcgccagttgcat
aatgctggaattgagctaaatgagattgcgattttgtatcgttccaatgcccaatcacgg
gtttttgaacaacatctttataatcgtgggattgcttatcgggtttatggaggcttacgc
ttttttgaccgacaagaaatcaagcgagtacttgcctatttacgtttgattattaatccg
agcgataatgaagcatttttgcgcgtagttaattttccagctagagggattggcccacga
acgattgaacaattacaggaaactgctactcagttaaagcgttctctttttgatactgtg
gatgaattaactggtaaacttaaagtatcacttagcaaatttactgatttgataaggttg
atgcagatagaaagcaaggtgcttaatcttgcggagactattagctatgttattgaaact
agtggtattcgcgaacattatgagaatgatcctaaagaaggcgaagagcgtattgagaat
ctaaatgagctgatctcggctgttactggttttcaagctgaagatacaactaatccgctg
gttgaatttttggcacatgcagtacttgaatcaggtgataatcaggcaaatagctatgat
tctgcggttcagttaatgacggttcacgctgctaaagggcttgagtttaaagtagttttt
gtcgttggtttggaagatggtttatttccgcatgagaattgcttaaataatctgaaagaa
gtcgaagaagagcgccgtttgatgtatgttgcaatcacccgggctaaagaaaagctctac
ctcatgcgtgcatgtagtcgcctaatgtggggtaagcgactggctgcacctatttccaga
tttgttaatgaaattccggcagagttaatcaagaatatttctggagtaagtaaaatcggc
tatagtgagttgtctggttattatgacccagcagagagtaattatagtggaatgcgaaac
tcacgtgctgaatttgaacacccagagacaaaaacctcgcgagtatctttgaaagacagt
gatgttactctcaaaatcggtgatatgataaaacatgccaagtttggcaatggtaaaatt
cttcgcctaaatgcagatggcaaaaaaatgactgctgagatattttttatcggaattggt
aaaaaaacactggatttaaatattgcaaatattgagaaagtttaa
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