Neisseria bacilliformis: H3L91_02350
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Entry
H3L91_02350 CDS
T06984
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nbc
Neisseria bacilliformis
Pathway
nbc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nbc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H3L91_02350 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nbc03021
]
H3L91_02350 (rpoC)
03400 DNA repair and recombination proteins [BR:
nbc03400
]
H3L91_02350 (rpoC)
Enzymes [BR:
nbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H3L91_02350 (rpoC)
Transcription machinery [BR:
nbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H3L91_02350 (rpoC)
DNA repair and recombination proteins [BR:
nbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H3L91_02350 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
DUF5979
Motif
Other DBs
NCBI-ProteinID:
QMT47995
LinkDB
All DBs
Position
466279..470493
Genome browser
AA seq
1404 aa
AA seq
DB search
MKALLDLFNPLQAAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLF
CAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFL
KSLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEEDYYQKLEEYGDDFD
AKMGAEGIRDLLAGLNIAAEVETLRQELESTNSDTKIKKIAKRLKVLEAFQRSGMKLEWM
IMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKR
MLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITV
GPYLRLHQCGLPKKMALELFKPFIFHKLELRGEASTVKAAKKLVEQEVPVVWDILDEVIR
EHPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQ
MEARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDKINGLGEGSLFADVREVHRAY
HTKQVELGTKITVRLREWEKNAAGEFEPVVKRYETTVGRALLSEILPKGLPFEYINKALK
KKEISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISICVDDMEIPQEKPALLAEA
QAEVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDREGKEVDQE
SFNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLSVLQYFIATH
GARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEPLRD
RILGRVAAQDIVDPATNETLVEAGTMLSEQLVDLIDNSGVDEVKVRTPITCKTRYGLCAK
CYGRDLARGKLVNTGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGT
ARFNSQMRYVANNKGELIVIGRSCEVVIHDDIGRERERHKVPYGATLLVQDGATVKAGTT
LATWDPHTRPMITEHAGTVKFENVEEGVTVAKQTDEITGLSTLVVIDGKRRSSSASKLLR
PTVKLLDENGEEVKIPGTETAVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDIT
GGLPRVAELFEARIPKDAGMLAEVTGTVSFGKETKGKQRLVITDVDGVAHETLISKEKQI
LVHDGQVVNRGETVVDGSVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVI
IRQMLRRVNIADAGDTRFITGEQVERADVMAANEKAEAEGKGPARFDNILLGITKASLST
DSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLTYHRTRRRQWAEQ
QEAAQEDAARFTAAEEAPGEQPQA
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattgctagatttgtttaaccccctgcaagcagcaggaatggaagaagaattc
gacgccatcaaaatcggcatcgcctcgcccgaaaccatccgctcgtggtcttacggcgaa
gtgaaaaaacccgaaaccatcaactaccgcaccttcaaacccgagcgcgacggcctcttc
tgcgccaaaatcttcggcccggtaaaagactacgaatgcctgtgcggcaaatacaaacgc
ctgaaattcaaaggcgttacctgcgagaaatgcggcgtggaagtaaccctgtccaaagtg
cgccgcgaacgcatgggacacatcgaactggccgcccccgtcgcccacatctggtttttg
aaatccctgccttcccgactgggcatggtgctggacatgactctgcgcgacatcgaacgc
gtcctctattttgaagccttcgtcgtaaccgaccccggcatgaccccgctgcaacgccgc
cagctgctgaccgaagaagactactatcagaagctggaagaatacggcgacgatttcgac
gccaaaatgggcgcggaaggcatccgcgacctgctcgccggcctcaacatcgccgccgaa
gtggaaaccctgcggcaggagctggaaagcaccaattccgacaccaaaatcaaaaaaatc
gccaaacgcctgaaagtgctggaagccttccagcgcagcggcatgaagctcgaatggatg
attatggacgtgctgcccgtgctgccgcccgatttgcgcccgctcgtcccgctggacggc
ggccgcttcgccacatccgatttgaacgacctctaccgccgcgtcatcaaccgcaacaac
cgcctcaaacgcctgctcgaactgcacgcgcccgacatcatcgtgcgcaacgaaaaacgc
atgttgcaggaagccgtcgattcgctgctggacaacggccgccgcggcaaagccatgacc
ggcgccaacaaacgcccgctcaaatcgctggccgacatgatcaaaggcaaaggcggccgc
ttccgtcaaaacctgctgggcaaacgcgtggactactccggccgctccgtgattaccgtc
ggcccctacctgcgcctgcaccagtgcggcctgccgaaaaaaatggccttggagctgttc
aaacccttcatcttccacaaactcgaactgcgcggcgaagcgtccaccgtcaaagcggcg
aaaaaactggtcgagcaggaagtgcccgtggtttgggacatcttggacgaagtcatccgc
gaacaccccatcatgctcaaccgcgcgcccaccctgcaccgcttgggcattcaggcgttc
gagccgattctgatcgaaggcaaagccatccagctgcatcccttggtgtgcgccgcgttc
aacgccgacttcgacggcgaccaaatggccgtccacgttccgttgagccttgaagcgcag
atggaagcgcgcaccctgatgctggcctccaacaacgtgctctcgcccgccaacggcgag
ccgattatcgtgccttcgcaggacatcgtgctcggcctctactacatgacccgcgacaaa
atcaacggtttgggcgaaggcagcctgtttgccgacgtgcgcgaagtgcaccgcgcatac
cacaccaaacaggtcgagttgggcaccaaaatcaccgtgcgtctgcgcgagtgggagaaa
aacgcggcgggcgaattcgagccggtggtcaaacgctacgaaaccaccgtcggccgcgcc
ctgctgtcggaaatcctgcccaagggcctgccgtttgaatacatcaacaaagccttgaag
aaaaaagaaatctccaagctgattaacgcctccttccgcctgtgcggcctgcgcgacact
gtgattttcgccgaccacctgatgtataccggcttcggcttcgcggccaaaggcggcatc
tccatctgcgtggacgacatggaaatcccgcaggaaaaacccgccctcttggccgaagcc
caggccgaagtgaaggaaatcgaagaccaataccgtcaaggcttggttaccaacggcgaa
cgttacaacaaagtggtggacatctggggacgcgccggcgacaaaatcgccaaagcgatg
atggacaacctgtccaaacagaaagtcatcgaccgcgagggcaaagaagtcgaccaagag
tcgttcaactccatctacatgatggccgactccggcgcgcgcggctcggcggcgcagatc
aaacagctctccggcatgcgcggcctgatggccaaaccggacggctcgattatcgaaacc
ccgattacctccaacttccgcgaaggcttgtcggtgctgcaatacttcatcgcaacgcac
ggcgcgcgcaaaggcctggccgacaccgcgctcaaaaccgccaactccggctacctcacc
cgccgtctggtagatgtaacccaagacctggtggtcgtggaagacgactgcggcacctcc
gacggcttcgtcatgaaagccgtggtacagggcggcgacgtcatcgaacccctgcgcgac
cgcatcctgggacgcgtggccgcgcaggacatcgttgatcccgccaccaacgaaaccctg
gttgaagccggcaccatgctctccgagcagcttgtcgacctgatcgacaactccggcgtg
gacgaagtcaaagtccgcacccccatcacctgcaaaacccgctacggcctgtgcgccaaa
tgctacggacgcgaccttgcgcgcggcaaactggtcaacaccggcgaagccgtcggcgtg
attgccgcccagtccatcggcgaacccggcacccagctcaccatgcgcaccttccacatc
ggcggcgcggcctcccgcgcggcggcggccagccaggtggaagccaaatccaacggtacg
gcgcgtttcaacagccagatgcgctacgtcgccaacaacaaaggcgaactcatcgtcatc
ggccgctcttgcgaagtcgtcatccacgacgacatcggccgcgagcgcgaacgccacaaa
gtgccctacggcgcgacactgctggtgcaggacggcgcaaccgtcaaagctggcaccacc
ctggccacctgggatccgcacacccgcccgatgattaccgaacacgccggcacagtgaaa
ttcgagaacgtcgaagaaggcgtaaccgtcgccaaacaaactgacgaaatcaccggcctg
tccaccctcgttgtcatcgacggcaaacgccgttccagcagtgccagcaaactgctgcgc
ccgaccgtgaagctgctcgacgaaaacggcgaagaagtgaaaatccccggcaccgaaacc
gccgtatccatggccttccccgtcggcgcggtgattaccgtgcgcgaagggcaggaaatc
ggcaaaggcgacgtactggcgcgtatcccgcaggcatcgtccaaaacccgcgacatcacc
ggcggcctgccgcgcgtggccgaactgtttgaagcccgcatccccaaagacgcaggcatg
ctggccgaagtaaccggcaccgtctccttcggtaaagaaaccaaaggcaaacagcggctg
gtcatcaccgacgtggacggcgtggcgcacgaaaccctgatttccaaagagaaacagatt
cttgtccacgacggtcaggtcgtgaaccgaggtgaaaccgtcgtcgacggctcggtagac
ccgcacgacatcctgcgcttgcaaggcatcgaagccctcgcccgctacatcgtgcaggaa
gtgcaggaggtttaccggctgcaaggcgtgaagatttccgacaaacacatcgaagtcatc
atccgccagatgctgcgccgcgtgaacatcgccgacgccggcgacacccgcttcattacc
ggtgaacaggtcgaacgcgccgacgtcatggccgccaacgagaaagccgaagccgaaggc
aaaggacccgcccgcttcgacaacatcctcctcggcatcaccaaagcctccctgtccacc
gacagcttcatctccgccgcctccttccaggagaccacccgcgtgctgaccgaagccgcc
atcatgggcaaacgcgacgaactgcgcggcctgaaagaaaacgtcatcgtcggccgcctc
atccccgccggcaccggcctcacctaccaccgcacccgccgccgccagtgggcggaacag
caggaagcggcgcaggaagacgcggcacgcttcaccgccgccgaagaagcccccggcgaa
cagccgcaggcgtaa
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