Neisseria bacilliformis: H3L91_09215
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Entry
H3L91_09215 CDS
T06984
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
nbc
Neisseria bacilliformis
Pathway
nbc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nbc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H3L91_09215 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nbc03021
]
H3L91_09215 (rpoD)
Transcription machinery [BR:
nbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H3L91_09215 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
TMPIT
MitMem_reg
Vps54_N
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
QMT47096
LinkDB
All DBs
Position
complement(1893343..1895292)
Genome browser
AA seq
649 aa
AA seq
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MSNQPDNQDYEEQEDGNRPLTPEEQRQRLRLLILQGKERGYITYAEINDALPDDMSDAEQ
IDNIVNMIQGLGIQVTEEAPDADTLLMNDTGTGMTDDDAVEEAEAALSNADSEFGRTTDP
VRMYMREMGQVDLLTREDEIIIAKKIENALKNMIQAISACPGSIAEILGLIEQVRSGEIK
VDEVVEAILDPNEVLMHELGVSDLEVIPPGSRPSDRAAEEENDEDGDEEDGASSEEIDRI
NLEELKQDVLAHFAGISENYGLMVEALQAKGSKHPDYLKHRDAIAHKLLEVRFATRQIEN
LSGSLRQKVDNIRKLEREIRDICLDRVQMDRDYFIAQFLPNITDLGWLEGEIARRRVWGD
ALERFRHAILEKQTEVAEMEKSAQISIEELKEINKNMQNSERETARAKEEMIQANLRLVI
SIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQAR
TIRIPVHMIETINKMNRISRQYLQEHGEDPDSAKLAELMEMPEDKIRKIMKIAKEPISME
TPIGDDDDSHLGDFIEDVNNVAPAEAAMYSSLREVTADVLESLTPREAKVLRMRFGIDMN
TDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSDRLKSFLDSEEGK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccaacccgacaaccaagactacgaagaacaggaagacggcaaccgcccgctc
acccccgaagagcaacgccagcggctgcgcctgctcatcctgcaaggcaaagagcgcggc
tacatcacctacgccgaaatcaacgacgcgctgcccgacgacatgtccgacgccgagcag
atcgacaacatcgtcaacatgattcagggtctgggcatccaggtaaccgaagaagccccc
gacgccgacaccctgctgatgaacgacaccggcaccggcatgaccgacgacgacgccgtg
gaagaagccgaagccgccctctccaacgccgactccgaattcggccgcaccaccgacccc
gtgcgcatgtacatgcgcgaaatggggcaggttgacctgctcacccgcgaagacgagatc
atcatcgccaaaaaaatcgaaaacgccctgaaaaacatgatacaggccatctccgcctgt
cccggctccatcgccgaaatcctcggcctcatcgaacaggtgcgcagcggcgaaatcaaa
gttgacgaagtggtggaagccatcctcgaccccaacgaagtgctgatgcacgaattgggt
gtgagcgatctggaagtcatcccgcccggtagtaggccgtccgaccgcgccgccgaagaa
gaaaacgacgaagacggcgacgaagaagacggcgcgtcctccgaagaaatcgaccgcatc
aacctcgaagagctcaaacaggacgtactggcgcactttgccggcatcagcgaaaactac
ggcctgatggtggaagccttgcaggccaagggcagcaaacaccccgactacctcaaacac
cgcgacgccatcgcccacaaactgctcgaagtgcgctttgccacccgccagatcgaaaac
ctcagcggcagcctgcggcagaaagtggacaacatccgcaaactcgaacgcgaaatccgc
gacatctgcctcgaccgcgtgcagatggacagagactacttcatcgcccaattcctgccc
aacatcaccgacctgggctggctcgaaggcgaaatcgcccgccgccgcgtgtggggcgac
gccctcgaacgcttccgccacgccattctggaaaaacagaccgaagtggccgaaatggaa
aaaagcgcgcagatttccatcgaagaattgaaggaaatcaacaaaaacatgcaaaacagc
gagcgcgaaaccgcacgggcgaaagaagaaatgattcaggccaatttgcgtctcgtcatc
tccatcgccaaaaaatacaccaaccgcggcttgcagtttctcgatttgattcaggagggc
aacatcggcttgatgaaggccgtggacaagtttgaataccggcgcggctacaaattctcc
acctacgccacatggtggatacgccaggccatcacccgctcgattgccgaccaggcgcgc
accatccgcatccccgtgcacatgatcgaaaccatcaacaaaatgaaccgcatctcgcgc
caatatctgcaagagcacggcgaagaccccgattccgccaaactggccgagctgatggaa
atgccggaagacaaaatccgcaaaatcatgaaaatcgccaaagagccgatttcgatggaa
acccccatcggcgacgacgacgattcgcacctgggcgacttcatcgaagacgtcaacaac
gtcgcccccgccgaagcggccatgtattccagcctgcgcgaagtaaccgccgacgtgctc
gaaagcctcaccccgcgcgaagccaaagtgctgcgtatgcgtttcggcatcgacatgaac
accgaccacacgctggaagaagtgggcaaacagtttgacgtaacccgcgagcgcatccgc
caaatcgaagccaaagccctgcgcaaactgcgccaccccacccgcagcgaccgcctgaaa
agtttcctcgacagcgaagagggcaaatag
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