Neisseria bacilliformis: H3L91_09490
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Entry
H3L91_09490 CDS
T06984
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
nbc
Neisseria bacilliformis
Pathway
nbc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H3L91_09490 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbc03400
]
H3L91_09490 (sbcB)
Enzymes [BR:
nbc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
H3L91_09490 (sbcB)
DNA repair and recombination proteins [BR:
nbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
H3L91_09490 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H3L91_09490 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H3L91_09490 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
GAGA
Motif
Other DBs
NCBI-ProteinID:
QMT48820
LinkDB
All DBs
Position
1956067..1957485
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AA seq
472 aa
AA seq
DB search
MPQPTFFIYDYETFGIHPARDRPAQFAGIRTDPDFNPVADPITLYCKQTNDYLPSPESVL
ITSITPQECNQKGVPEPEFAARICAEFSQPNTCIMGYNNIRYDDEITRHTFYRNFLDPYE
YSYQNGNSRWDLLDVVRACHALRPEGIEWPRDENGLPVFRLEQLTAANGIEHAHAHDALS
DVYATIALAKLIKQKQPRLFRFFFENRGKAPLAAMIDIRRHTPLVHISGMFGNARRNTAL
IAPLSWHPSNKNAVIACDLSADLRDLLNLNADTLRERLYTPKETLLAQGALPVPLKLVHI
NKCPILTPRNVLRDEDAERLGIDNTICQNNLAALQNAPEIRQKVQQIFRETRQFAPSDNV
ETELYNGFFSPADKQNLATLRTLPPEQLANHGLPFQDPRIPQLLFHYRARHFYPTLTRAE
QIQWQKYRRKKLEAALPDFSQSLQNLAEQNADNPDKLLLLQAVYQYAERLLG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgccccaacccaccttcttcatctacgactacgaaacattcggcatccaccccgcccgc
gaccgccccgcccaatttgccggtatccgcaccgaccccgatttcaaccccgtcgccgac
ccaatcacactctattgcaaacaaaccaacgactacctgccctcgcccgaatccgtgctg
attaccagcatcaccccgcaagagtgcaaccaaaaaggcgtgcccgagcccgaatttgcc
gcgcggatttgcgccgaattttcccagcccaacacctgcatcatgggctacaacaacatc
cgttacgacgacgaaatcacccgccacaccttctaccgcaacttcctcgacccctacgaa
tacagctaccaaaacggcaactcccgctgggacttgctcgacgtcgtccgcgcctgccac
gccctgcgccccgagggcatagaatggccgcgcgatgaaaacggcctgcccgtgttccgc
ttggaacaactcaccgccgccaacggtatagaacacgcccacgcccacgacgcgctctcc
gacgtgtacgccaccatcgcgctggcgaaactcatcaaacaaaaacagccgcgcctgttc
cgcttcttctttgaaaaccgaggcaaagccccactcgccgccatgatagacatccgccgc
cacaccccgctggtgcacatctctggcatgttcggcaatgcccgtcgcaacaccgcgctc
atcgccccgctctcatggcacccgagcaacaaaaacgccgtcatcgcctgcgacctgtcc
gccgatttgcgcgatttgttaaacctgaatgccgacaccctgcgcgaacgcctctacacc
cctaaagaaaccctgctcgcacaaggcgcgctgcccgtgccgctcaaactcgtccacatc
aacaaatgccctatcctcaccccgcgcaatgttttgcgagacgaagatgccgaacgttta
ggcatagacaacacgatttgccaaaataacctagccgccctgcaaaacgcgcccgaaatc
cgccaaaaagtacaacaaatcttccgcgaaacccgccaatttgcgcctagcgacaacgta
gaaaccgaactgtacaacggctttttcagccccgccgacaaacaaaacctcgccaccctg
cgcaccctgccgcccgaacaactcgccaaccacggcttgccattccaagacccgcgcatc
ccccaactgctgttccactaccgcgcccgccatttctacccaaccctcacccgcgccgaa
caaattcaatggcaaaaataccgccgcaaaaaactggaagccgcgctccccgatttcagc
caaagcctgcaaaatctggcggaacaaaacgccgataatcccgacaaactgctgctgttg
caggcggtttatcagtatgcggagcggttgttgggttga
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