Nocardioides baekrokdamisoli: Back2_00580
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Entry
Back2_00580 CDS
T06654
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
nbe
Nocardioides baekrokdamisoli
Pathway
nbe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Back2_00580
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM96
RHS_repeat
DUF6531
Motif
Other DBs
NCBI-ProteinID:
BBH15771
UniProt:
A0A3G9IQ83
LinkDB
All DBs
Position
complement(59578..65883)
Genome browser
AA seq
2101 aa
AA seq
DB search
MLSARSEGVPVEDLSQRTETSQTWAQPDGSWKTEIHSRQQRFRDSHGHWVNVDLTLGTTP
DGGAAPTTTQNGLKLPGAGAGGAISLGDPGGRTVSLGMPGKLPKPTLSDATATYAGIAPG
VDMKIQALRSGFEQSFVINYRSAVSTSGLSWSLPLKTKGLDVRQESDGSVSFVDNKGVVR
SRIPAALAWDSRVGTPQESPASYSKVSLQVVVKNPGQATLVITPDASWLNDPSTVFPVTV
DPTYLMSSLNPVWDTYIQQGFTTNFASSTVLKVGSASANANTRSFINFDLSSLKGKYVIG
ANLKLRNSLSGTCSAREWDAYYMTGTAGPSWGWGNQNYWGSMQASSTQTLGASGSCPADW
VAIDTTTLVQNMLNDSQSINTIGLRAANETDATYVKQFDSMETTNDPVLNVQYDRYPNGP
SVASLASPSVSYPNGDVYTATSTPALAASATDPDSNSVQVDIQVHNSTAFNSGSLVAECQ
SGFVASAASASCQPSPALPDGTYYVRSKASDSMQWGPWTGTYTFKVAATQPAVPVISCPG
YANGTWATTAPGSAVSCTISAAGSGTSAPNAVLYTVDGGSQQTATISPSSDPNVAKATIS
VPNTAGAHSVLAQAQSPSGVKSSQSPSYGFGYGTVAMNSPSASAVTQTTSTVAIQASAPA
PPSGGQATAELRWRLPNGGDANTGWNDATSLTVANNPGTGGVSISGTWDTTTATRDAAAG
INLDPRVPTTLELQVCVTYPGTSYCTWTNQQVRTIRLPHAFGNGFPTTHAGPGEVALWTG
EFTTTATDVTVPGYNGTLSLSRTHSTFAGPVDPAESVFGPGWTASLDGTAGSGLAGDQLV
DNTQTDGTLALVDAQGTPMVFAPAGGPVRRTGGNLTTGSWTAVDPDTIAAGVSATVSGTG
SSTVVAVTEADGTATTFHATTAPGTGVAGVFAPVSVAQPGSGTTTYTLDGSGRVTRILAP
IPTGMTASNCPATGTLAPGCRALDINYATTTTATSTASGDFAGQVSSINLRIYNPTKSGG
AGMDSIPVAAYKYDNTGRLVTETDPRTNLSTSYGYDSGNRLTMLTPPGQAPYTINYAGSP
TKFANLTRPNPASAGGGTATLTSVVYNVPTSGSGLPDLSAGTVGKWDQAAAPTHAYAVFG
QNHPVSSIDPSQIGSSNWVYAQIQATDDKGFTVNAATYGAGDWQRSAIDYDASTQQVIKT
ISPTDIDQVLTYGADPNTVGTITQYNTATNGPASTPSGSVITDVWLPSRPVALANGTTVS
ARPHTHTTYDQGSPDNGVNPTTNQGWELPTSVTQTVSSPLISNGDLTDTAHITKTGYGNT
EASWELGLPTSNTQVVDGGSGDITKSTGYDSEGRVISQSQPMSNGSDAGTRDTVYYTVAA
NSGVPQCGGHPEWAGSVCETYFAAQANGHDQVTTTDSAYNTYLVPSTVIETANGATRTRS
ISFDSAGRPITSRTTASGLTGSTPVNGTGIDYDPSTGLAVRVWALNSSGGHIGDPITTGY
DSWGRTIGYSPSSVVTTTTTYNSAGQVSSIADTAGTKSFGYGTDANGNAENRGMPTSETI
TGGPGGNIAFAGAYDRSGALVVQKLPAGVTQKVQTDPAEQVVGMTYSGQVTTVNPDNSTS
VNPNGPWLGWTLTRDSLGRITRENTPAAGGYVTGGIDPTKTLAAAPFDRSYSYDLAGRLS
QVQDRTAAAGAGVNSSTGEPNGAGCVTRSYAFDKNGNRLSLATAPAASDGTCQTSSGTST
RTWGWDAGDRTTNSGYVFDAFGRQTTLPAADAPQSGGGNITLGYYDTDAVASISQGSSST
TFTLDQSQRRSIQTETAGSVVTTTARTYDDTSDNPAYVDVTNGGATTRTRYATSLGGDLG
LTITSSGSTSAQITLADPNGDVVATADVTSNTTPAVGISGWSDQDEYGNPLENTPSAITA
GIGYGWAGTSQRATVDSGLMLMGARIYNPSTGGFTSTDPVYGGNHTTYAYPSDPVNRGDL
SGAAGSWHTYYKSYYFYYKQTNGIAGYFGYTHWTENLMNGIVAKVLAKDPFATFAYYGNW
VNTTYYWQWRWANKVHGPQQYRIMADTIVYTYARLLFWSGGPGWWVYVGTVEDYHQDGDI
W
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggctcggtctgagggggtcccggttgaggatctatcgcagcgcactgaaacg
tcgcaaacgtgggcccagcccgacggatcctggaagaccgaaatccactcgcggcagcag
cgcttccgggattctcacgggcactgggtaaatgtcgacctgacgttgggcacgacgcct
gacggtggcgctgctcctacaactacccagaacgggctcaagctgccgggggccggcgct
ggcggcgcgatttcgctcggagaccccggcggccgcacggtctccctcggaatgcccggc
aagctcccgaagccgacgctgagcgacgcgacggcaacatacgcgggtatcgctccgggt
gtggacatgaagatccaggcgcttcgatcgggcttcgagcagtcgttcgtgatcaactat
cgctcggctgtcagcaccagcggtttgtcgtggtcgctgccactgaagactaagggcctc
gatgttcggcaagagtccgacgggtcggtgtcgttcgtggacaacaagggtgtagtccgg
tcgcggatccctgcggcgctcgcatgggattcgcgcgtcggcacgccgcaggagtcgcca
gcctcctacagcaaggtatcgctgcaggtggtcgtgaaaaaccccgggcaggcgacgctg
gtgattacgccagacgcctcgtggttgaacgacccgtcgacggtgttcccggtgacggtc
gaccccacgtatctgatgtcgtcgctgaacccggtgtgggacacctacatccagcaggga
ttcacgacgaacttcgcctcctcgaccgtactgaaggtcggttccgcctcggccaatgcc
aacacacgctccttcatcaacttcgacctgtcctcgttgaagggcaagtacgtcatcgga
gcgaacctgaagctccgcaattccctttcggggacgtgctcggcccgtgaatgggacgcg
tactacatgaccggcactgcaggtccttcgtggggttggggcaaccagaactactgggga
tcgatgcaggcttcgtcaactcagacccttggggccagtggctcatgtcctgccgactgg
gtggcaattgacacgacaacactggttcagaacatgttgaacgactcccagtccatcaac
acgatcgggctccgtgcagccaacgagaccgacgcaacgtacgtcaagcagttcgactcg
atggagacgacgaacgaccccgtcctgaacgtgcagtacgaccgataccccaacggcccg
tcggtcgcctcgttggcctcaccgtcggtgtcctaccccaacggtgacgtgtataccgca
acctcgacgcccgcactagcggcctcggcaaccgaccccgacagcaacagcgtccaggtc
gacatccaggtccacaactccaccgcgttcaactccgggtctttggtcgcggagtgccag
agcggatttgttgcctcggcagcctcggcctcctgccagccctcgcctgcactgccggac
ggcacctactacgtgcggtccaaggcatcggactcgatgcaatggggaccgtggacgggt
acctacaccttcaaggtcgcagcaacccagccagccgtgccagtgatcagctgccccgga
tacgccaacggcacctgggccaccacggctccggggtcagcggtctcgtgcacgatctct
gccgccgggtcggggacatcggcgccgaatgcagttctctacacggttgacggtggcagc
cagcagacggccacgatcagcccgtcttctgacccgaatgttgcgaaggcaacgatcagc
gttcccaacacagctggtgcgcattcggtcctcgcgcaggcgcagtcgccgtcgggcgtg
aaatcctcgcagtctccgtcgtacgggttcgggtatggcaccgttgccatgaacagcccg
tcagcttccgcggttacccaaaccaccagcaccgtcgcgattcaggccagcgcccctgcc
ccaccctcaggtggccaggccacggctgaactgcgttggcgtctgccgaacggcggcgat
gccaacaccgggtggaacgacgcaacatctctgacggttgccaacaacccgggcaccggt
ggcgtttctatctctggaacctgggacaccaccaccgcgacccgcgacgccgccgccggc
atcaacctcgacccacgcgtgccgacgacgctggaacttcaggtgtgtgttacctatccc
ggaaccagttactgcacttggaccaaccagcaggtgcgaaccattcggctgccgcacgca
ttcgggaacggcttcccgaccacccacgcgggccccggtgaggtggcattgtggaccggc
gagttcaccacgactgccaccgacgtcacagtccccggatacaacggcactttgtcgctg
tctcgcacccactcgacgttcgccggtccggttgaccctgccgaatcggtcttcggacct
gggtggaccgcgtcgttggatgggaccgcgggcagtggcctggctggtgaccagctggtc
gacaacacccagaccgacggaacgctggctttggttgacgcgcagggcactccgatggtg
ttcgcaccagccggcggacctgttcgccgcaccggtggcaatctgaccactggatcgtgg
accgcagtggatcccgacacgatcgctgcgggcgtctcggcgaccgtatccggaactggc
tcctccaccgtcgttgctgtgaccgaggcagatggcacggcaaccactttccacgccacg
acggcccccggaaccggtgttgcgggtgtgttcgcaccggtatcggtggcgcagcccgga
agcggaaccaccacctacaccctcgacggttcgggccgagtgacccggatcctggcgccg
atcccgaccggcatgaccgcaagcaactgccccgcaaccggcaccctcgcacccgggtgc
cgcgcgttggacatcaactacgcgaccacaaccaccgcaacgtcaaccgcttctggtgac
ttcgccgggcaggtgtcctcgatcaatctacggatctacaacccgaccaagtctggtggc
gccggcatggactcgatcccggtggccgcctacaagtacgacaacactgggcgtctggtg
accgaaaccgaccctcgcacgaacctgtcgacctcctacggctacgactccggcaaccgt
ctaaccatgctgaccccgccgggccaggcaccgtacaccatcaactacgccgggtcgccg
actaagttcgcgaacctcacccgccccaacccggcttctgctggtggcgggaccgcgacc
ctgacgtcggtggtctacaacgtcccgacctccggcagcggtctacctgacctgtcggcc
ggcacggttgggaagtgggaccaggcggccgccccgacgcatgcgtacgcggtgttcggt
cagaaccaccctgtcagcagcatcgacccttcgcagattggatcctcgaattgggtctat
gcccagatccaagccaccgacgacaaggggttcaccgtcaacgccgccacctacggcgca
ggggactggcagcggagcgccatcgactacgacgcgtccacccagcaggtcatcaagacc
atctcgccgacggatattgaccaggtccttacctacggggccgaccccaacaccgtcggg
accatcacgcagtacaacaccgcgacgaacgggcccgcgtcgacgccttccggatccgtg
atcacggacgtgtggctgcccagccgacccgtcgcgttggccaacggcaccactgtgtcc
gcccggccgcacacccacaccacctacgaccaagggtcgcccgacaacggggtgaacccc
accaccaaccagggctgggaactgccgaccagcgttactcagacggtgtcctccccgctg
atctccaacggtgacctgaccgacaccgcgcacatcactaagaccggatatggaaacacc
gaggcatcctgggagctcggactcccgacctcgaacacccaggtcgtcgacggcggatca
ggtgacatcactaagagcaccggctacgacagcgaaggccgcgtgatcagccagtcccag
ccgatgtcgaatgggtcagacgccgggacacgagacaccgtctactacaccgtcgcggcg
aacagcggcgtgccacagtgcggtggccaccccgaatgggccggatcggtctgcgagacc
tactttgccgcgcaggcgaatggtcacgaccaggtcacaaccacggacagcgcctacaac
acctatctggtgccgagcactgtgatagagactgcgaacggtgctacccggacccgcagc
atcagcttcgacagtgcagggcgcccgatcacctcacgtacaacagcatccggattgacc
ggctcgactccagtcaacggcactggaatcgactacgacccgtcaaccgggctggctgtc
agagtgtgggctttgaacagcagcggtggccatatcggcgacccaatcacgaccggatac
gacagctggggacggacgattgggtactcaccgtcgtcggttgtgaccacgaccacgacc
tacaactccgcgggtcaggtcagcagcatcgccgatactgcaggcaccaagagtttcggg
tatggaaccgacgccaacggcaacgctgagaaccgtggcatgccgaccagcgaaacgatt
actggtggtcctggcgggaacatcgcgttcgcgggcgcctatgaccgatccggggcgttg
gtggtccagaagcttcctgcgggtgtcacccagaaggttcagactgaccccgcagaacag
gtggtcggtatgacgtattcaggtcaagtcaccacagtgaacccggacaactccaccagc
gtgaacccgaacggcccgtggttgggttggacgctgacccgcgacagcctgggtcgaatc
acccgggagaacacgccagccgccggtggttacgtgaccggcgggatcgaccccaccaag
accttggcggcagcaccgttcgaccggtcctacagttacgacctcgcaggtcgcctgtcc
caggtccaggaccggaccgccgccgcgggcgcgggggtgaacagctcaacgggtgagccc
aacggtgcaggctgtgtcacgcggtcgtacgcgttcgacaagaatggcaaccgactcagc
ctggccacagcgcccgcagcatccgacggcacatgtcagactagctccggcaccagcacc
cgcacctggggatgggacgccggcgaccggacgaccaacagcggttacgtgttcgatgcg
ttcgggcgccagaccacgcttccggcagccgacgccccgcagtcaggcggtggcaatatc
acgctcggctattacgacactgacgccgtagcatcgatcagccagggaagttcgagtacg
acgttcacgctggaccagtcacagcggcgctcgatccagacagagaccgctgggtccgtg
gtcacgaccacagctcggacctacgacgacacctccgataacccggcctatgttgacgtc
accaacggtggcgctacgacccggactcggtacgccacgagcctgggcggggacctaggt
ttgacgattacctcgagcggatcgactagtgcccagatcacgttggctgatccgaacggg
gatgtggttgcgaccgccgacgtgacctccaacacgacgccagctgtagggatcagcgga
tggtccgaccaagacgaatacggcaacccgctggagaacacaccgtcggcgatcaccgcc
gggattggatacggttgggcgggtacgtctcagagggcgaccgtcgacagcgggctgatg
ctgatgggcgcacgaatctataacccctcgaccggaggattcacctccactgacccggtg
tacggcggcaatcacaccacttacgcatatccgtcagatccggtaaaccgaggagatctc
tcgggagcggcgggctcctggcacacttactacaagagttactatttctactacaaacag
accaacggcatcgcaggatatttcggttacacccattggactgaaaacctgatgaacgga
atagtcgccaaagtgttggccaaggatccattcgcgaccttcgcctactatggcaattgg
gttaacacgacctattactggcaatggagatgggccaataaggttcacggcccacagcaa
taccggattatggccgacaccatcgtctacacatatgcccggttactcttttggagcgga
ggtcctggatggtgggtgtatgtaggcacagtggaggactaccaccaggatggcgacata
tggtga
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