Nocardioides baekrokdamisoli: Back2_02470
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Entry
Back2_02470 CDS
T06654
Name
(GenBank) helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
nbe
Nocardioides baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nbe03019
]
Back2_02470
Enzymes [BR:
nbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Back2_02470
Messenger RNA biogenesis [BR:
nbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Back2_02470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
DUF6283
Motif
Other DBs
NCBI-ProteinID:
BBH15960
UniProt:
A0A3G9IB15
LinkDB
All DBs
Position
275031..277808
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AA seq
925 aa
AA seq
DB search
MSDDTDLSPAAAYAASRRKQGYPVFNDFAGLYSFGLDDFQVRACHEIEDGRGVLVAAPTG
SGKTIVGEFAIHLAIATGRKAFYTTPIKALSNQKYNDLVARYGASNVGLLTGDNVVNGEA
PVVVMTTEVLRNMLYASSSTLTGLGYVVMDEVHYLADRNRGAVWEEVIIHLPESVSVVSL
SATVSNAEEFGEWLTTVRGETTTIIEEKRPVPLFQHVMVGRRILNLFASSDVDAQAGFVK
EGALVNDELMKIARDDWASSRMRDRRAPRGAAGQGGPRQPGNGRRVWIPARPDVIAAMER
ANLLPAIIFIFSRVGCDAAVQQCLAAGVRLTTAEERDEVIKRVDGACRDLSVEDRHVLGY
HEFLDALSRGVASHHAGMLPAFKEIVEDLYVAGFIKVVFATETLALGINMPARTVLIEKL
TKWNGEVHADLTPGEYTQLVGRAGRRGLDVEGHGVVLWQSGMNPRELAGLASTRTYPLKS
SFRPSYNMAVNLVHHFGRARSRELLEQSFAQFQADRSVVGIARQVRKAEDAHAGYVEAAV
CDRGDFMEYAGLRNRISEMEKASARDRRADRRVEIVASLEQLKPGDVIQVPTGKFAGPAL
VIDPGFDPDSPRPYVLTVERQARRLAIIDFNRPVVPRGHMRLPRGFNGRDPQQRRTLAMQ
LRERVKDMPHDREVARDRQTNDPLEREIADLRAQIKLHPCHECPDREDHARWAERAFKLS
RDTDGLRRRVEARTNTVARQFDRVCDILTALGYLDGDTVTDRGRRLMRLYSELDLLAAES
LRAGLWDQLNPAELAAALSALVFEARRADDGAPRVPGGKAGEALREMAKLAGELQSLERE
YHLDFLRLPDPGFAWAAYRWAEGDDLDDVLGTVDMAAGDFVRNMKQLIDVAGQVADAAGD
SPVRTTARGLIGRLKRGIVAYSTLD
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgatacggatctcagtccggccgcggcgtacgccgcctcccggcgcaagcag
ggctacccagtcttcaacgacttcgccgggctctattccttcgggctggacgacttccag
gtacgcgcctgtcacgagatcgaggatggtcgcggggtgcttgttgcggcaccgaccgga
tccgggaagacgatcgtgggggagttcgcgatccacctggcgatcgccaccggccgcaag
gccttctacacgacgccgatcaaggcgctgagcaaccagaagtacaacgacctcgtcgca
cgctacggcgccagcaacgtcggccttctcaccggagacaacgtcgtcaacggcgaggcg
ccggtggtcgtgatgaccaccgaggtgctccgcaacatgttgtacgcgagctcctccacc
ctgaccggtctgggctacgtggtcatggacgaggtgcactacctggccgatcgcaaccgt
ggcgcggtgtgggaagaggtgatcatccacctgcccgagtcggtcagcgtggtgtcgctg
tccgcgaccgtcagcaacgccgaagagttcggtgagtggttgacgaccgtacgcggcgag
acgacgacgatcatcgaggagaagcggccggtgccgctgttccagcacgtcatggtcggt
cggcggatcctgaacctgttcgcgtcctccgatgtcgatgcccaggccggcttcgtcaag
gaaggtgccctggtcaacgacgaactgatgaagatcgcccgggacgactgggccagcagc
cggatgcgagaccgacgcgctcctcgcggtgccgcgggccagggtgggccgcgacaaccg
ggcaacggtcggcgggtctggatccccgctcggcccgacgtcatcgctgcgatggagcgg
gcgaacctgttgccggcgatcatcttcatcttcagtcgcgtcggctgtgacgccgccgtc
cagcagtgtctggccgcaggtgtacgcctcaccacggcggaggagcgcgacgaggtcatc
aagcgggtggacggtgcgtgccgagacctgagcgtcgaggaccggcacgtcctcggctat
cacgagttcctggatgctttgtcgcgcggtgtcgcctcgcatcacgccgggatgcttcct
gccttcaaggagatcgtcgaggatctctacgtcgccgggttcatcaaggtcgtgttcgcc
accgagaccctcgccctgggcatcaacatgccggcccgtacggtgctcatcgagaagctg
acgaagtggaacggcgaggtgcacgccgatctgacgccgggggagtacacccagctcgtc
gggcgtgcgggacgccgtggactcgatgtcgaaggtcacggcgtcgtcctgtggcagtcc
ggaatgaatccgcgtgaactcgccggcctcgcctcgacgcgtacgtacccgctgaaatcc
agcttccgaccgtcgtacaacatggccgtcaatctcgtgcaccacttcggccgcgcccgt
tcccgcgagttgctcgagcagtccttcgcccagttccaggcggaccgctcggtcgttggc
atcgcccgccaggtccggaaggccgaggacgcgcacgccgggtatgtcgaggctgcggtc
tgcgacaggggcgacttcatggagtacgccgggctgcgcaatcggatctccgagatggag
aaggcctcagcccgggatcgccgcgcagaccggcgggtcgagatcgtcgcctcactggag
cagctcaagccgggcgacgtgatccaggtgccgaccgggaagttcgccggacccgcgctc
gtgatcgatccgggcttcgatcccgacagcccgcgaccgtacgtcctgacggtcgagcgc
caggctcgccggctcgccatcatcgacttcaaccggcccgtcgtgccgcgtggtcacatg
cgactgccccgcgggttcaacggccgggatccgcaacagcggcgcacgctcgcgatgcaa
ctgcgtgaacgggtcaaggacatgccccatgaccgtgaggtcgcgcgcgaccgccagacc
aatgaccccctggagcgtgagatcgcggacctgcgcgcccagatcaagctccacccgtgc
cacgagtgcccggaccgggaggaccacgcgcggtgggccgagcgcgcgttcaagctgtcc
cgtgacaccgacggtctgcgtcgacgtgtcgaggcgcgtacgaacaccgtcgcgcgccag
ttcgaccgcgtctgcgacattctgacggccttgggctacctcgacggcgacactgtgacg
gatcgcggccgccgactgatgcggctctactccgaactcgatctgctggcagccgagtct
ctgcgagccggactctgggaccagctcaaccctgcggagctcgcagccgccttgtcggcc
ttggtcttcgaggctcgtcgagccgacgacggcgcgccgcgggttccgggaggcaaggcc
ggtgaggccctgcgcgagatggcgaagttggctggcgagctgcagtcgcttgagcgcgag
taccacctcgacttcctgcgacttcccgacccgggcttcgcctgggccgcataccgctgg
gccgagggcgacgacctcgatgacgtcctgggcaccgtcgacatggcggcaggagacttc
gtccgcaacatgaagcagttgatcgacgtcgccggtcaggtcgcagacgcagccggggac
agcccggtgcgtacgaccgcccgcggtctgatcggccggctcaagcgcgggatcgtcgcg
tactccactctcgactga
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