Nocardioides baekrokdamisoli: Back2_03890
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Entry
Back2_03890 CDS
T06654
Symbol
holA
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nbe
Nocardioides baekrokdamisoli
Pathway
nbe03030
DNA replication
nbe03430
Mismatch repair
nbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Back2_03890 (holA)
03430 Mismatch repair
Back2_03890 (holA)
03440 Homologous recombination
Back2_03890 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbe03032
]
Back2_03890 (holA)
03400 DNA repair and recombination proteins [BR:
nbe03400
]
Back2_03890 (holA)
Enzymes [BR:
nbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Back2_03890 (holA)
DNA replication proteins [BR:
nbe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Back2_03890 (holA)
DNA repair and recombination proteins [BR:
nbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Back2_03890 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
DNA_pol3_gamma3
LD_cluster2
Motif
Other DBs
NCBI-ProteinID:
BBH16102
UniProt:
A0A3G9ICK9
LinkDB
All DBs
Position
complement(428338..429285)
Genome browser
AA seq
315 aa
AA seq
DB search
MPPIATNPLGRVLLITGSAEFLAERAVADARKAVRTVDPDVEISEVGADDLSSIEDVAAP
SLFSSVRCVIVRQLENLSDEAVASLLAYAAEPADDIALVLVHSGGQKGSGVLGKLRKLAA
VSETVAAEPKPREYVGFVTSEVRGAGGRIDPGAVELLIEAVGQDLRGLASAASQLVDDFP
GEAITEDRVRQYFGGRAEVKNYVIADAIMSGQRAKAFEEIRWALNTGSSPVYILSAVAGQ
ARTVANHVAGRRDRNVPDWKVRQVAGIARGWTPGGIAQAVRAIAQADADAKGNTADGTYV
LERLVLTVAALRDGH
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgatcgccaccaacccgctgggacgggtgctgctgatcacgggctcggccgaa
ttcctggccgagcgggcggtggccgatgctcgcaaggccgtgcgtacggtcgacccggat
gtcgagatctccgaggtcggcgccgacgacctgtcctcgatcgaggatgtggcggcgccc
tcgctcttctccagcgtccggtgcgtgatcgtgcgtcaactcgagaacctgtccgacgag
gccgtcgcaagcctgctggcgtacgccgcagagcctgccgacgacatcgccctcgtgctc
gtgcactccggggggcagaagggttcgggagttcttggcaagctgcgcaagttggcagcg
gtcagcgagaccgttgccgctgagccgaagccacgtgagtacgtcggattcgtgacgtca
gaggtccgcggtgccggcggacgcatcgatccgggcgcggtcgaactgctcatcgaagcg
gtcggacaggacctgcgcgggctggcttcagcggccagccaactcgtggacgacttcccg
ggcgaggcgatcaccgaggatcgcgtgcggcagtacttcggcggacgcgccgaggtgaag
aactacgtcatcgccgacgccatcatgtcgggtcagcgggccaaggcgttcgaggagatc
cgctgggccctcaacaccggctcgtcgccggtctacatcctgtccgcagtcgcggggcag
gcgcgtacggtcgccaaccacgtcgctgggcgacgcgaccggaacgtgccggactggaag
gtccgtcaggtcgccggtattgcccgcgggtggactcccgggggcattgcgcaagccgta
cgcgcgatcgcgcaggccgatgcagatgccaagggcaacaccgccgacgggacgtacgtg
ctggagcggttggtgctcaccgtcgcggctctgagagacgggcactag
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