Nocardioides baekrokdamisoli: Back2_04780
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Entry
Back2_04780 CDS
T06654
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nbe
Nocardioides baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbe03032
]
Back2_04780
03400 DNA repair and recombination proteins [BR:
nbe03400
]
Back2_04780
Enzymes [BR:
nbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Back2_04780
DNA replication proteins [BR:
nbe03032
]
Prokaryotic type
DNA Topoisomerases
Back2_04780
DNA repair and recombination proteins [BR:
nbe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Back2_04780
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BBH16191
UniProt:
A0A3G9IRD4
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Position
514985..517465
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AA seq
826 aa
AA seq
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MARTTPAPPEDFEEHILDIDVGDEMRSSFLEYAYSVIYSRALPDARDGLKPVQRRILYTM
HDMGLRPDRGHVKSARVVGEVMGRLHPHGDSAIYDALVRLTQPWAMRLPMIDGHGNFGSL
DDSAAAMRYTEARMAPAALAMTASIDEDTVDFKPNYDSREYEPSVLPAAIPNLLVNGTSG
IAVGMATNMAPHNLVEVVSALRHLINHPKADLDELMRFIPGPDLPTGGTIVGLDGIRDAY
ATGKGSFKIRATARIETIGRRKGIVVTELPYMVGTEKVVENIKTLVQAKKIQGIADVIDL
TDKNNGTRLVIEVKNGFIPEALLEQLYKSTKLEDSFGINNVCLVDGQPRTLGLKELLEVF
LGHRFEVVRRRSQFRRNKAASRLHLVEGLLLAIVDIDEVIQVIRTSDNAAMAKERLISIF
ELSELQAEYILDMALRRLTKFSKLELDTEQEDLLRTIQELDAILGDDKLLRKVVSDELGE
VAKTYGTPRRTVLLASAGTAVTAAQAAKIQTEIADDPCFALLSSTGLLARTSDGEVPAAG
GPRANHDLITSAVAATARGEIGVLTSGGRLLKLSVLDLPAIPPTAGEPNLQGGVPLGALL
SLDIGERALAMCRLTTDGPGLALGTRSGVVKRVNPEVLGKDEWPVINLDPGDEVVGAVEL
TTGAETLCFITSDAQLLQFSAEGVRPQGRNAVGMKGVNVAAGHRVLFFGAFDANDAVVVT
SAGSSTALPGVQPGSVKVTPFTEYPPKGRATGGVRCQRFLKGEDTLLVAWAGPGPARAAA
SSGSPVPLPEIDPRRDGSGVIVGQPIDAIAGPVGAGLSGSGLVSEA
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaccactcccgctccacccgaagacttcgaggagcacatcctcgacatcgac
gtcggggacgagatgaggtcgtccttcctggagtacgcctactcggtcatctacagccgc
gcacttcccgacgcgcgcgacgggctcaagccggtccagcgccggatcctctacacgatg
cacgacatgggcctgcggcctgatcgtggtcacgtgaagtcggcccgcgtggtcggtgag
gtcatgggtcggctccacccgcacggtgacagcgcgatctacgacgccctcgtacgcctg
acgcagccgtgggcgatgcgtcttccgatgatcgatggccacggcaacttcgggtcgctc
gacgactcggccgccgccatgcgttacacggaagcccggatggcgccagccgccctggcg
atgacggcctcgatcgacgaggacaccgtcgacttcaagccgaactacgacagccgcgag
tacgagccttcggtcctgcccgccgcgatcccgaacctgctggtcaacggcacctccggc
atcgcggtcggcatggcgaccaacatggcgccgcacaaccttgtcgaggtcgtcagcgcg
ctgcgtcacctgatcaaccatccgaaagccgacctcgatgagctgatgcggttcatcccc
gggccggacctgccgaccggcggcaccatcgtcggcctcgacggcatccgggacgcgtac
gccaccggcaaggggtcgttcaagatccgggccacggcgcgcatcgagaccatcggtcgc
cgcaagggcatcgtggtcaccgaactgccgtacatggtgggcaccgagaaggtcgtcgag
aacatcaagaccctcgtccaggccaagaagatccagggcattgccgacgtcattgacctg
accgacaagaacaacggcacccgcctggtgatcgaggtcaagaacgggttcatccccgag
gccctgctcgagcagctctacaagtcgaccaagctcgaggactcgttcggcatcaacaac
gtgtgcctcgtcgacgggcagccacgcacgctcggcctcaaggaactgctcgaggtcttc
ctgggacaccgcttcgaggtcgtacgccgccggtcgcagttccgtcgcaacaaggcggcg
tcgcgactccaccttgtcgaaggactcctgctggcgatcgtcgacatcgacgaggtcatc
caggtgatccgcaccagcgacaacgctgcgatggccaaggaacgcctgatcagcatcttc
gaactgtccgaactccaggccgagtacatcctcgacatggcgctgcgtcgactgaccaag
ttctccaaactcgagctcgacacggagcaggaggacctgctccgcacgatccaggaactc
gacgcgatcctcggcgacgacaagcttctccggaaggtcgtctccgacgagctcggcgag
gtcgccaagacgtacggcacgccgcgacgcactgtgctgctggcttcggccggcaccgcc
gtcactgccgcccaggcggcgaagatccagaccgagatcgccgacgacccgtgcttcgca
ctgctgtcctcgaccggcctgctggcgcgtacgtccgacggcgaggtcccggctgccggc
ggcccgcgtgcgaaccacgatctgatcacctcagcggtcgcagcgacggcccggggcgag
atcggcgttctcacctcggggggccggctgctcaagctgtcggtgctcgacctgccggcg
atcccgccgaccgcgggcgaaccgaacctgcagggtggcgtacccctcggggcactgctg
tccctggacatcggcgagcgcgcgcttgcgatgtgtcgcctgaccaccgacggaccgggt
ctggcgctcggcacccgctccggggtcgtcaagcgggtcaaccccgaggtgctcggcaag
gacgagtggccggtgatcaatctcgacccgggcgatgaggtcgtcggcgctgtggaactg
accaccggcgccgagacgctgtgcttcatcacctcggatgcgcagctgttgcagttcagc
gccgagggcgtacgcccgcagggtcgcaatgccgtcggcatgaagggcgtcaacgtggcg
gccggacaccgggtgctgttcttcggtgccttcgatgcgaacgacgccgtcgtcgtcacg
tctgccggctcatccaccgccctgcccggggtgcaacccggcagcgtcaaggtcactccg
ttcaccgagtacccgcccaagggtcgcgccaccggcggcgtacggtgccagcggttcctc
aagggcgaggacacgttgttggtcgcctgggccggtcccggacctgctcgcgcagcggcc
agctcgggctcacccgtccccctcccggagatcgatccgcggcgcgacggatcaggagtg
atcgtcggtcaaccgatcgatgcgatcgccgggccggtcggtgccggactgtccggctcg
ggtctagtgtcggaggcatga
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