Nocardioides baekrokdamisoli: Back2_05140
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Entry
Back2_05140 CDS
T06654
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nbe
Nocardioides baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbe03032
]
Back2_05140
03400 DNA repair and recombination proteins [BR:
nbe03400
]
Back2_05140
Enzymes [BR:
nbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Back2_05140
DNA replication proteins [BR:
nbe03032
]
Prokaryotic type
DNA Topoisomerases
Back2_05140
DNA repair and recombination proteins [BR:
nbe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Back2_05140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
Rv2466c-like
Motif
Other DBs
NCBI-ProteinID:
BBH16227
UniProt:
A0A3G9IBJ9
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Position
complement(552041..554029)
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AA seq
662 aa
AA seq
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MYIGSTDTRGLMHCLWEIIDNGVDEALAGAAHSVSVTLHKDGSVEVYDDGRGIPIDKEPK
TGLTGVEVVATKLHAGGKFGGSSYAATGGLHGVGLSVVNALSSRMDIDVDRSPARQGISF
KRGVAGVFAGEGPAAGFTPGSGLSRKGARVAKAKTGTLIRFWPDKQIFTKDADFVLDGLV
GRARQTSFIVPGLELVIRDERSAEATEERFKHDGGIAEFVDFLTHDEPVTSILRLQGSDT
FTETVPMLDEQGHMTPQDVERELFVDVALRWGMGYDTEIKSFVNVIATPKGGTHVSGFEG
ALTRTFNDCMKASRVLKANDDDVIKDDVLEGLTAVVTVRLAEPQFEGQTKEILGTPAART
VVRKVVAAELKKFLTSTKAAEKAQAKLVMDKVYGAARTRLTLRQQKETQRRKNALESSSL
PAKLADCRANDNERTELFIVEGDSALGTAKMARNSEFQALLPIRGKILNVQKASVGDMLK
NTECASIIQVVGAGSGRTFDLDAARYGRIIFMADADSDGAHIRTLLATLFFKYMPEMVKA
GRVYSAVPPLHRIELSNPKKGMDKYVYTYSDDQLQRTLADLKKRNVNWKDPVQRYKGLGE
MDADQLAETTMDPRHRTLRRLTVDDVEAAAQVFELLMGNDVAPRKEFIVAGAYEVDASAL
DA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcggctcgaccgacacccgcggactgatgcactgcctgtgggagatcatcgac
aacggcgtggacgaggccctggccggtgccgcgcacagcgtgtcggtgacgctgcacaag
gacggctccgtcgaggtgtacgacgacggtcgcggcatcccgatcgacaaggaacccaag
accggtctgaccggtgtcgaggtcgtggcgaccaagctgcacgccggtggcaagttcggc
ggctcctcctacgctgccaccggtggtctgcacggtgtgggcctgtcggtggtgaacgcg
ctgtcgagccggatggacatcgatgtcgaccgttcgccggcgcggcaggggatcagcttc
aagcgcggcgtcgccggtgtgttcgccggcgaaggcccggccgctgggttcacgcccgga
tcggggctctcgcgcaagggtgcccgggtcgcgaaggcgaagaccggcacgctgatccgg
ttctggccggacaagcagatcttcaccaaggacgccgacttcgtcctggacggtctggtg
ggccgtgcccggcagacctcgttcatcgtcccggggctggaactcgtcatccgcgacgag
cgttccgcggaagccacggaggagcgcttcaaacacgacggtggcatcgccgagttcgtc
gacttcctgacccacgacgaaccggtcacctcgatcctgcgcctgcagggctccgacacg
ttcaccgagaccgtgccgatgctcgacgagcagggccacatgactccgcaggacgtcgag
cgcgaactgttcgtcgacgtcgccctgcggtgggggatgggctacgacaccgagatcaag
tcgttcgtcaacgtgatcgccaccccgaagggcggcacccacgtgagcggcttcgagggt
gctctgacgcgtacattcaacgactgcatgaaggcgagccgcgtactcaaggccaacgac
gacgacgtgatcaaggacgacgtcctcgagggcctcacggccgtggtgaccgtacgtctg
gcggaaccgcagttcgagggtcagaccaaggagatcctcggcacgccggcggcgcgtacg
gtcgtgcgcaaggtcgtcgccgccgaactgaagaagttcctcacctccaccaaggccgcc
gagaaggcgcaggccaagttggtgatggacaaggtgtacggcgcggccaggacccggctc
accctgcgtcagcagaaggagacccagcggcgcaagaatgcgctcgagtcgtcctcgctg
ccggcgaagctcgccgattgtcgtgccaacgacaacgagcgcaccgaactcttcatcgtc
gagggtgactcggcgctcggcaccgcgaagatggcacgcaactcggagttccaggccctc
ctgcccatccgcggcaagatcctcaacgtccagaaggcctcggtcggcgacatgttgaag
aacaccgagtgcgcctcgatcatccaggtggtcggtgccggatcggggcgtacgttcgac
ctcgacgcggcccgctacggccggatcatcttcatggctgacgccgactccgacggcgcc
cacattcgtacgctgctggcgacgctgttcttcaaatacatgcccgagatggtcaaggcc
ggccgggtctacagcgccgtgccaccgctgcaccggatcgagttgtccaaccccaagaag
gggatggacaagtacgtctacacctactccgacgaccagttgcagcggacgttggccgat
ctgaagaagcgcaacgtgaactggaaggacccggtgcagcgctacaagggtctcggcgag
atggacgctgaccagttggccgagaccaccatggacccgcgccaccggacactgcgccga
ctcacggtcgacgacgttgaggcggcggcgcaggtcttcgaactgttgatgggcaacgac
gtcgcgccgcgcaaggagttcatcgtggcgggcgcgtacgaggtggacgcgagcgcgctg
gacgcgtga
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