Nocardioides baekrokdamisoli: Back2_06830
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Entry
Back2_06830 CDS
T06654
Name
(GenBank) hypothetical protein
KO
K03090
RNA polymerase sigma-B factor
Organism
nbe
Nocardioides baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nbe03021
]
Back2_06830
Transcription machinery [BR:
nbe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Back2_06830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Sigma70_r4
HTH_Crp_2
HTH_28
HTH_23
HNH_repeat
HTH_Tnp_ISL3
HTH_37
Sigma70_ECF
HTH_Tnp_4
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
BBH16396
UniProt:
A0A3G9IDG1
LinkDB
All DBs
Position
721457..722128
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AA seq
223 aa
AA seq
DB search
MDTDELIRSHLPLVDSIARRYIGRGEPLEDLRQAGALGLVLAARRWEPGREITFGAYATP
VVTGEIRRHLRDHGRLVRLPRRVWESAGRCRGAVRELTARLGRPPTTDEIAAHVGIDTAA
VIEALNASAWPARLEEIAETSQPVPPPDRSLQALGSLRPGQRRLLELVVIDRQSQRQIAA
LYGISQAQVSRALSATVSDIRRLTADQGLPDHESPDNARVLAG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacgaactcattcgcagccacctccccttggtcgactcaatcgcccgtcga
tacatcgggcgcggagagcccctggaggatctccgacaggccggagcgctcggactggtc
ctggccgcccgtcggtgggagcccggccgcgagatcacattcggcgcgtacgcgactccc
gtggtgaccggcgagatcagacgacatctgcgagatcacggccgactcgtacggctcccc
cgccgggtctgggaatccgcagggcgttgccgaggagcagtacgcgaactcacggcgaga
ctgggccgccctccgaccaccgacgagatcgccgcccacgtggggatcgacaccgccgcc
gtcatcgaggccctgaacgcgagcgcatggcccgctcggctcgaggagatcgccgagaca
tcgcagccggttccgcctccggatcgatcgcttcaggcactgggctcactacgcccgggg
cagcggcggctgctcgaactggtggtgattgaccggcagagtcagcggcagatcgcggcg
ctgtacggcatcagccaggcgcaggtctcacgagcactgtcggccacggtgagcgacatc
cggcggctcactgccgatcaggggcttccggatcacgagtcgccggacaacgcccgtgtg
ctcgccgggtga
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