Nocardioides baekrokdamisoli: Back2_09290
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Entry
Back2_09290 CDS
T06654
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nbe
Nocardioides baekrokdamisoli
Pathway
nbe03420
Nucleotide excision repair
nbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Back2_09290
03430 Mismatch repair
Back2_09290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbe03400
]
Back2_09290
Enzymes [BR:
nbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Back2_09290
DNA repair and recombination proteins [BR:
nbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Back2_09290
MMR (mismatch excision repair)
Other MMR factors
Back2_09290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
DUF8444
Terminase_6N
DEAD
Motif
Other DBs
NCBI-ProteinID:
BBH16642
UniProt:
A0A3G9IE56
LinkDB
All DBs
Position
complement(966994..969330)
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AA seq
778 aa
AA seq
DB search
MTDTADALLEGLNEPQAAAVVHAGTPLLVVAGAGSGKTRVLTRRIAWLISERKAHPGSIL
AITFTNKAAAEMKERVEDLVGRRAAIMWVSTFHSACVRILRKEIERLGFKSSFSIYDSQD
QKRLMQLVLNDLDLDAKRFPPNAVLNWVSDQKNELLDPDDVAKDAHNSLEEGYASAYAEY
QKRLKQANALDFDDLIMLTVRVFQLFPDVRETYRRRFRHVLVDEYQDTNHAQYALIAQLC
AGDPEGNDQVEPAELMVVGDADQSIYAFRGANIRNILDFEQDFPNATSIVLEQNYRSTQT
ILNAANSVIKNNAGRRDKKLWSEAGEGERIVGWVADDERDEARFVSGEIDKLVDDGQSAS
DVAVFYRTNAQSRVFEEVFIRTGQPYKVVGGVRFYERREIRDALAYLRMLANPDDQVSLR
RILNTPKRGIGDRAVELINDLANRDDLTFWQALQRADQAPGLATRSESNIKAFVTMVEEL
QQLVEAGERADVILETALARSGYLEWLEASDDPQDETRIENLAELVAVAREFSDDPQAGP
SADPADVDAGLVTPGLNDFLERVALVADADQIPDDEEGVVTLMTLHTAKGLEFPIVFLTG
LEDGVFPHSRALGDTTELEEERRLAYVGITRARERLFLSRAVVRSAWGAPSYNPASRFLD
ELPVDLVDWKRNAAQQTRWNRPETGGNDWGAGNRFGPPTAAGRRNFSAAAARADAAAKAR
TPVEIPSLEPGDRISHDAFGLGTVVVVEGVAEKAIASIDFGSQGVKRLLLRYARVDKL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccgccgacgccctcctcgaagggctcaacgagccccaggccgccgcggtg
gtccacgccgggacaccgctcctcgtcgtcgctggcgccggctcgggcaagacccgcgtg
ctcacccgacgcatcgcctggctgatctcggaacgcaaggcccacccgggcagcatcctg
gcgatcaccttcaccaacaaggcagcggccgagatgaaggagcgcgtcgaggatctggtc
ggccgccgcgccgcgatcatgtgggtctcgaccttccactccgcgtgcgtacgcatcctg
cgcaaggagatcgagcgactgggcttcaagtcgagcttctcgatctatgactcccaggac
cagaagcggctgatgcagctcgtgctcaacgacctggatctggacgccaagcgtttcccg
ccgaacgctgtcctcaactgggtcagtgaccagaagaacgagctcctcgacccggacgac
gtggccaaggacgctcacaacagcctggaggaggggtacgcgtcggcgtacgcggagtac
cagaagcggctcaagcaggcgaacgccctcgacttcgacgacctgatcatgttgacggtc
cgggtgttccagctcttccccgacgtacgcgagacctatcgtcgccgcttccgccacgtc
ctggtcgatgagtaccaggacaccaaccacgcccagtacgccctgatcgcccagctgtgt
gccggtgacccagaaggcaacgatcaggtcgagcccgccgaactcatggtcgtgggtgac
gcggaccagtcgatctacgcgttccgcggcgccaacatccgcaacatcctcgacttcgag
caggacttccccaacgcgacctcgatcgtgctcgagcagaactaccgctccacgcagacg
atcctcaacgcggccaactcggtcatcaagaacaacgcgggccgtcgcgacaagaaactc
tggtccgaggcgggcgagggcgagcggatcgtcggctgggtcgccgacgacgagcgcgac
gaggcccgcttcgtcagcggtgagatcgacaaactggtcgacgacggtcagagtgccagc
gacgtggcggtgttctaccggacgaacgcccagtcgcgcgtcttcgaagaggtcttcatc
cgcaccggccagccgtacaaggtcgtcggtggcgtgcggttctacgaacgtcgcgagatt
cgggacgccctggcgtacctgcgcatgctggcgaaccctgacgaccaggtctccctgcgt
cgcattctcaacacgcccaaacgaggcatcggtgaccgggcggtcgagctcatcaacgac
ctcgccaatcgtgatgacctcaccttctggcaggcgctgcagcgggcggatcaggcgccg
ggtctcgccacccgcagcgagagcaacatcaaggccttcgtcaccatggtcgaagagttg
caacagctggtcgaggcgggcgagcgtgcggacgtcatcctcgagacggccctcgcccgg
agcggctacctcgagtggcttgaggcctccgacgaccctcaggacgagacccggatcgag
aatctcgccgaactggtcgcggtcgctcgcgagttcagcgatgacccgcaggccggcccg
tctgcggacccggccgacgtcgacgcaggtctggtcacgcccggtctcaacgacttcctc
gaacgtgtcgcgctcgtcgcggacgccgaccagatccccgacgacgaggagggcgttgtc
accctgatgacgctccacacggccaagggcctggagttcccgatcgtcttcctcacgggc
ctcgaggacggcgtcttcccgcattcgcgggcgctcggtgacaccaccgaactcgaggag
gagcgccgcctggcgtacgtcgggatcacccgagcacgcgagcggctgttcctttcgcgg
gcggtcgtacggtccgcctggggcgccccgtcgtacaacccggcttcgcgcttcctcgac
gaactcccggtcgacctcgtggactggaagcgcaacgctgcccaacagacgcgctggaac
cgtccggagaccggcgggaacgactggggtgcgggcaaccgtttcggtccgccgaccgcc
gcgggacgacggaacttcagcgccgcggcggcacgcgccgatgccgccgccaaggcgcgt
acgccggtggagatcccgtcgttggagcccggcgaccggatcagtcacgacgcgttcgga
ctcggcacggtggtcgtggtcgagggcgtggcggagaaggccatcgcgagcatcgacttc
ggtagtcagggcgtgaagcggctgttgttgcgctacgcccgcgtcgacaagttgtag
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