Nocardioides baekrokdamisoli: Back2_14480
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Entry
Back2_14480 CDS
T06654
Symbol
hemD
Name
(GenBank) uroporphyrinogen III methyltransferase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
nbe
Nocardioides baekrokdamisoli
Pathway
nbe00860
Porphyrin metabolism
nbe01100
Metabolic pathways
nbe01110
Biosynthesis of secondary metabolites
nbe01120
Microbial metabolism in diverse environments
nbe01240
Biosynthesis of cofactors
Module
nbe_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
nbe_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Back2_14480 (hemD)
Enzymes [BR:
nbe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
Back2_14480 (hemD)
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Gene cluster
GFIT
Motif
Pfam:
HEM4
Trans_reg_C
PrpF
RNase_H2_suC
Motif
Other DBs
NCBI-ProteinID:
BBH17161
UniProt:
A0A3G9IU56
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All DBs
Position
complement(1478620..1479738)
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AA seq
372 aa
AA seq
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MSEGHPLAGFRIGVTATRKADEQGALLERRGAEVVYAPALSLDPNRIDPATLRASTEEVI
GSPVDVFLVTTGIGLRGWFDAAEGWGLLDPLLERLKGAEILARGPKSVGALRARGLRELW
APESEEFDDVMAHLRGRDLAGKRIVVQEHGQSLSMVGHALRRMGAEVVSVAVYRVDPAID
PEPMFGLVEQVADGTVDAVTFTSAPAVASFMQAAGSVGRRDEVIAAFQADVVAASVGPVT
AAAFEMWGVPTIFPERSRLLPMITLLETELPSRRAGLTIELVGEHQLLLHGDEVLLDGAV
VKLSPAPAAVLQALIANPGNVVSRRALLAMLPSGNAGSEHAVEMAVARLRAALGTRAIQT
VVKRGYRLAVAG
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaaggtcatccgcttgcgggctttcggatcggcgtgacggccacccggaaggcc
gacgaacagggcgcgctcctggagcgccgcggtgccgaggtggtgtacgcgccggcgctg
tcgctggatccgaaccggatcgacccggccacgctgcgcgcctccaccgaggaggtcatc
ggctcaccggtcgatgtcttcctggtgaccacgggtatcggtctgcgcggctggttcgac
gccgcggagggctggggtctgctggacccgctgctggagcggctcaagggcgccgagatc
ctcgcccgcggtccgaagtcggtcggtgcgttgcgagctcgcgggctgcgggagctgtgg
gcgccggagtcggaggagttcgacgacgtgatggcgcacctgcgcgggcgcgatctcgcc
gggaagcggatcgtggtgcaggagcacggccagtcgctgtcgatggtcggccatgcgttg
cgtcggatgggtgctgaggtcgtctccgtcgcggtctaccgcgtggatccggcgatcgac
cccgagccgatgttcggtctggtcgagcaggtggccgacggaactgtcgacgcagtgacc
ttcacctcggcgccagccgtcgcctccttcatgcaggcggccggctcggtcgggcgtcgc
gacgaggtgatcgcagccttccaggccgacgtggtcgcggcgtcggtcggaccggtcacg
gccgcagccttcgagatgtggggtgtgcctacgatcttccccgagcgctcccgcctgttg
ccgatgatcacgttgttggagacggagctgccctcgcgccgtgccggtctcacgatcgaa
ctggtcggtgagcatcaactgttgctgcacggcgacgaggtcctgctcgacggtgccgtc
gtgaagctctcgccggcgccggcggccgtactccaggcgttgatcgcgaaccccggcaac
gtagtctcgcggcgcgcgctcctggcgatgttgccgtcgggcaacgccggatccgaacac
gcggtcgagatggccgtcgcgcgcctccgcgccgctctgggtacgcgggcgatccagacc
gtggtgaagcgcggctaccgcttggccgtcgccggctga
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