Nocardioides baekrokdamisoli: Back2_16160
Help
Entry
Back2_16160 CDS
T06654
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nbe
Nocardioides baekrokdamisoli
Pathway
nbe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Back2_16160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbe03400
]
Back2_16160
Enzymes [BR:
nbe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Back2_16160
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Back2_16160
DNA repair and recombination proteins [BR:
nbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Back2_16160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
BBH17329
UniProt:
A0A3G9J2V4
LinkDB
All DBs
Position
1662601..1663467
Genome browser
AA seq
288 aa
AA seq
DB search
MPELPEVDALVADLRRRLDGRAIVKLHVPQFSALKTFDPPLHALEGTLVDGVSRHGKFLD
IEASGLHLVIHLARAGWIRWRDSMPPVPPKPSTKSTLAVRVVLDDDSGIDITEAGTKKSL
AVHVVRDPQDVPGIASLGPDPLTDDFTVDVLAGILSDAGGKQLKGVLRHQGTIAGIGNAY
SDEILHAARMSPFKPSNGLSPDEVEVLWQAIRTTLFDAVKRADGVAASELKGEKKSNMAV
HGRTGLPCPVCGDTVREVSFADSSLQYCATCQTGGKPLADRRMSKLLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcccgaagttgacgctctcgtcgccgacctccggcgccggttggacggc
cgggccatcgtgaaactgcacgtgccgcagttcagcgcgctcaagacgttcgacccgccg
ctgcacgcactggaggggaccctggtcgacggggtctcgcgccacgggaagttcctcgac
atcgaggcgtccgggctgcacctggtgatccacctggcgcgggcgggctggatccgatgg
cgcgactccatgcccccggtgccaccgaagccgtcgaccaagtcgacgctggccgtacgc
gtggtcctcgacgacgactcgggcatcgacatcaccgaggccggcaccaagaagtcgctg
gccgtccatgtcgtacgcgacccgcaggacgtgccgggcatcgcctcgctcggccctgat
ccgctcaccgacgacttcacggtcgacgtcctggccggcatcctcagcgacgccggcggg
aagcagttgaagggcgttctgcgtcaccaggggacgatcgcagggatcggcaacgcgtac
tccgacgagatcctgcatgcggcgaggatgtcgccgttcaagccgtcgaacggcctgtcg
cccgacgaggtcgaggtgctctggcaggcgatccggacgacgttgttcgacgccgtgaag
cgtgccgacggcgtcgccgcgagcgaactcaagggcgagaagaagtccaacatggccgtg
cacggacggaccgggttgccgtgtccggtgtgcggcgacaccgtacgcgaggtgtcgttc
gcggactcgtcgttgcagtactgcgcgacgtgccagaccggcgggaagccgttggcggat
cgccggatgtcgaagctgctgaagtag
DBGET
integrated database retrieval system
