Nocardioides baekrokdamisoli: Back2_19950
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Entry
Back2_19950 CDS
T06654
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nbe
Nocardioides baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbe03032
]
Back2_19950 (topA)
03400 DNA repair and recombination proteins [BR:
nbe03400
]
Back2_19950 (topA)
Enzymes [BR:
nbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Back2_19950 (topA)
DNA replication proteins [BR:
nbe03032
]
Prokaryotic type
DNA Topoisomerases
Back2_19950 (topA)
DNA repair and recombination proteins [BR:
nbe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Back2_19950 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
Toprim_2
MarR_2
Motif
Other DBs
NCBI-ProteinID:
BBH17708
UniProt:
A0A3G9J2A6
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All DBs
Position
2031996..2034689
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AA seq
897 aa
AA seq
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MTHKLVIVESPTKAKKIGEYLGKGYVVESSLGHVRDLPESSADIPASIKGQPWARMAVDI
DNGFQPYYVVSRDRKSHLAELKRLLKDADELYLATDEDREGEAIAWHLLEELKPKKGIPV
KRMVFHEITRNAILEAASNPRELDMDLVEAQEARRILDRLFGYELSPVLWKKIGQQAKSA
GRVQSVATRLVVERERERIAFRSASYWDLEGSFDAGAAYQPRMFPAKLYSLDGVRVARGG
DFNDDGTLAAKNVAHVDRARAESLVASLADAAFDVLSVESKPYKRTPPQPFRTTTLQQEA
GRKLGMSSAVAMRVAQSLYENGLITYMRTDSTDLSATAIAAAQAQVTELYGAEYVATNVR
KGAKAAGAQEAHEAIRPSGERFLTPKQTGLSGDQFRLYELIWMRTVASQMKDAVGQTSTI
KLTATALTGEDVVFSASGTVITFHGFLKAYVEGKDDADEQSDDAESRLPAVVEGDRVSAA
SISAEGHETKPPARYTEASLIKALEDRGIGRPSTYASIMSTIQNRGYVTKKGSALVPAWV
AFVVIRLLEENFARYVDYDFTALLETALDEIAGGRSTRVKELDEFYFGSDRHTGLKTLVD
GSGEIDAKDLNTIPIGEGIDLRSGRYGPYIETVGDDGTPGGKRASVPDELAPDELTVARA
RELLANPAGEEIALGTHPESGLPIVAKSGRFGPYVTEVVGEDAPKGTKGRTGSLFKTMSL
DTISLDQALQLLSLPRVVGTAEDGEEITAQNGRYGPYLKKGVDSRTIASEDLLLTMTLPE
ALAIYAQPKYGGRRAATPPLKEFGADPVSGKPVVVKDGRFGPYVTDGETNATLRKDDPME
TLTAERAYELIAEKRAKGPGKKTTRRKAPAKKSAAKKTAAKKTAAKKTTAKKTAKKA
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
gtgacccacaagctcgtcatcgtcgagtctccgacgaaggccaagaagatcggcgagtac
ctcggcaaggggtacgtcgtcgagtcgtccctgggacacgtacgcgatctgcccgagagt
tcagccgacatcccggcgtccatcaagggccagccgtgggcccggatggcggtcgacatc
gacaacggtttccagccgtactacgtcgtgtcccgcgaccggaagtcccacctcgccgaa
ctcaagcgcctgctcaaggatgccgacgagctctacctcgccaccgatgaggaccgcgag
ggagaggccatcgcgtggcaccttctcgaggagttgaagcccaagaagggcatcccggtg
aagcggatggtcttccacgagatcaccaggaacgcgatcctcgaggcggcctccaacccg
cgcgagctcgacatggacctcgtcgaggcccaggaggcgcggcgcatcctcgaccgtctc
ttcgggtacgagctcagcccggtgctgtggaagaagatcggccagcaggccaagtccgcc
ggccgcgtccagtcggtcgcaacccgactcgtggtcgagcgtgaacgtgagcggatcgcg
ttccgcagcgcctcgtactgggacctcgagggctccttcgacgccggtgcggcgtaccag
cccaggatgttcccggcgaagctctacagcctggatggcgtacgcgttgcccgcggcggc
gacttcaacgacgacggcacgctcgccgcgaagaacgtcgcccatgtggaccgcgcccgc
gccgagagcctggtcgcatcactggccgatgccgccttcgacgtcctgagtgtcgagtcg
aagccgtacaagcggacgcctcctcagccgttccgcacgaccacgctgcagcaggaggcc
ggccgcaagctcggcatgagctccgcggtcgcgatgcgcgtggcgcagtcgttgtacgag
aacggtctcatcacctacatgcgtaccgactccaccgatctctccgcgaccgcgatcgct
gcggcgcaggcgcaggtgaccgagttgtacggcgctgagtacgtcgccaccaacgtccgg
aagggcgccaaggctgccggtgcccaggaggcgcacgaggcgatccgcccgtccggcgaa
cgcttcctcacaccgaagcagaccggtctgagcggcgaccagttccggctctacgagctc
atctggatgcgtacggtcgcctcccagatgaaggacgctgtcggtcagaccagcacgatc
aaactcaccgcgaccgccctcaccggcgaggacgtggtgttctccgcgtccggcaccgtg
atcaccttccacggcttcctcaaggcgtacgtcgagggcaaggacgacgcggacgagcag
tcggatgacgccgagtctcggttgcctgcggtggtcgagggtgaccgggtcagcgccgcc
agcatctcggccgagggtcacgagaccaagccgccggcgcgctacaccgaggcctccctg
atcaaggcgctcgaggaccgcggcatcggtcgcccgtcgacgtacgcctcgatcatgagc
acgatccagaaccgcggctatgtcacgaagaagggctcggcgctcgtgccggcctgggtg
gcgttcgtggtcatccgattgctggaggagaacttcgcccggtacgtcgactacgacttc
accgcgctcctggagaccgcgctggacgagatcgccggtggtcgctcgacccgcgtgaag
gaactcgacgagttctacttcgggtctgaccggcacaccgggctcaagaccctggtcgac
ggctccggagagatcgacgcgaaggatctcaacaccatcccgatcggcgagggcatcgac
ctgcgctcgggccgttacggcccctacatcgagaccgtcggggacgacggcaccccggga
gggaagcgcgcatcggtcccggacgaactggcaccggacgagctcaccgtggcccgggcg
agggagttgctggccaacccggccggcgaggagatcgccctgggtacgcacccggagtca
gggctgccgatcgtcgcgaagagtggtcgcttcggaccgtacgtgaccgaggtcgtcggt
gaggacgcgccgaagggtacgaagggccgcaccggctcgctgttcaagaccatgtcgctc
gacacgatctcgctggaccaggcgttgcagctgctctcgctcccgcgcgtggtgggcacc
gccgaggacggcgaggagatcaccgcccagaacggccgctacggcccgtacctcaaaaag
ggcgtcgactcccgcacgatcgcgtcggaggacctgctcctcacgatgacgttgcctgaa
gcgctggcgatctacgcgcagccgaaatatggcgggcgtcgtgcggcgacgccaccactc
aaggagttcggggcggacccggtctccggcaagccggtcgtggtcaaggatggtcgcttc
ggcccgtacgtcaccgacggtgagacgaacgcgaccctgcgcaaggacgacccgatggag
acgctcaccgcagagcgggcgtacgagctgatcgcggagaagcgcgcgaagggtccgggc
aagaagacgacccgccggaaggccccggcgaagaagagcgctgccaagaagacggccgcc
aagaagaccgcggcgaagaagacgactgccaagaagacagcgaagaaggcctga
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