Nocardioides baekrokdamisoli: Back2_22260
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Entry
Back2_22260 CDS
T06654
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nbe
Nocardioides baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nbe03016
]
Back2_22260
Enzymes [BR:
nbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Back2_22260
Transfer RNA biogenesis [BR:
nbe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Back2_22260
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BBH17939
UniProt:
A0A3G9J4I8
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Position
complement(2247662..2248900)
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AA seq
412 aa
AA seq
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MTEEVAEEAVEQAPLLKLRDPHPVVMDDDAGLARAAAAIKAGTGPVAIDAERASGYRYSN
RAYLIQIAREGAGNWLIDPIAMTSMAPLIDALDGTEWVLHAATQDLPCLGELGLHPAALF
DTELAGRLLGYPRVGLGTLTEEVLGWRMLKEHSAADWSTRPLPEAWLEYAALDVEVLVEL
RDAMHDELIAADKWTWAQQEFESLLSFQPAVRVEPWRRTSGAHSVRTRRGLAVVKALWEA
RDDIAQDRDCTPGRLIPDSAIIAAALAEPASRGQLLGTKGFHGRGAKTYIDIWMSAIDHA
LTQDEEELPERTPRASGPPQPRAWADRDETAARRLDTARAGITAMAEANNLPPENLLQPD
AMRRLLWEPPTTRDPGDLLDDVVGRLQWSGARPWQIAMTASLLTDAILSADH
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaggtggccgaggaggccgtcgagcaggctcccctgctgaagctgcgcgat
ccgcacccggtcgtcatggacgacgacgccgggctggcgcgtgcggcagcggcgatcaag
gccggcaccgggccggtggcgatcgacgctgagcgcgcttcggggtaccgctactcgaac
cgtgcctatctgatccagatcgcccgcgaaggcgctggcaactggctgatcgacccgatc
gcgatgacctcgatggcacctctcatcgacgcgcttgacggcaccgagtgggtcctgcac
gcggccacccaggacctgccctgcctcggcgaactcggtctgcatcccgccgcgctcttc
gacaccgaactcgccggccggctgctcggctacccccgcgtcggcctcggcaccctcacg
gaggaggtgctcggctggcggatgctgaaggagcactccgccgccgactggtcgacgcga
ccgctgcccgaggcatggttggagtacgcggcgctcgacgtcgaggtactggtcgaactg
cgcgatgccatgcacgacgaactcatcgccgccgacaaatggacctgggcgcagcaggag
ttcgagtcgttgctgtccttccagcccgccgtccgggtggagccgtggcgtcgcacgtcc
ggcgcacattcagtgcgtacgcgccgcggcctcgcggtcgtcaaggcactgtgggaggcg
cgcgacgacatcgcccaggaccgggactgcactcccggcaggctgatcccggacagcgcg
atcatcgcggccgcactcgctgagcccgcgtcgcgaggccaactgctcgggacgaagggg
ttccacggtcgcggggcgaagacgtacatcgacatctggatgtccgcgatcgaccacgcg
ctgacccaggacgaggaggagttgccggagcgtacgcctcgggcctccggtcccccgcag
ccacgcgcctgggccgaccgggacgagaccgccgcccgccggctggacactgcccgggcc
gggatcaccgcgatggccgaagccaacaatctgccgccggagaacctgctccagcctgac
gccatgcggcgactcctctgggagccaccaacgacgcgcgaccccggcgacctgctcgac
gatgtcgtcggtcgacttcagtggtcgggcgcgcgtccgtggcagatcgcgatgacggca
tcgctgctgaccgacgcgatcctcagcgccgatcactga
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