Nocardioides baekrokdamisoli: Back2_25460
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Entry
Back2_25460 CDS
T06654
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nbe
Nocardioides baekrokdamisoli
Pathway
nbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Back2_25460 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nbe03019
]
Back2_25460 (pnp)
03016 Transfer RNA biogenesis [BR:
nbe03016
]
Back2_25460 (pnp)
Enzymes [BR:
nbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Back2_25460 (pnp)
Messenger RNA biogenesis [BR:
nbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Back2_25460 (pnp)
Transfer RNA biogenesis [BR:
nbe03016
]
Prokaryotic type
tRNA degradation factors
Back2_25460 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
KH_1
PNPase
RNase_PH_C
KH-I_KHDC4-BBP
S1_RRP5
PCB_OB
KH_PNO1_2nd
KH_2
Motif
Other DBs
NCBI-ProteinID:
BBH18259
UniProt:
A0A3G9J5I8
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All DBs
Position
2580938..2583169
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AA seq
743 aa
AA seq
DB search
MTEPVISAVETVLDNGKFGKRTVKFETGLLARQAAGSVTAYLDDETMLLSATTASKQPKD
HFDFFPLTIDVEERMYAAGKIPGSFFRSEGRPGEDAILTCRLIDRPLRPTFVKGLRNEVQ
VVITVMALDPNQPYDVLAINAASASTQLAGLPFSGPVGATRVALIEGQWVAFPTHSQLED
AVFDMVVAGRVTETGDVAIMMVEAEAPEQAWDLIQGGAQAPTEAIVAAGLDASKPFIKQL
CEAQAELAKQAAKPVGEFKVFLDYQDDVYAAVDAAVGDDVRALYSASNGLDKLAREAKGD
DIKAALLDKIGADFEGREGEIGAAFKSVTKQAIRTQVLRDKVRIDGRGLADIRPLHAEVS
VIPRVHGSALFERGETQILGVTTLDMLKMEQQLDTLSPEKHRRYMHKYIFPPFSTGETGR
VGSPKRREIGHGALARRALLPVLPSREEFPYAIRQLSEAMGSNGSTSMGSVCASTLSLLE
AGVPLKAAVAGIAMGLISGEVDGQTQYVALTDILGAEDAFGDMDFKVAGTSEFVTALQLD
TKLDGIPASVLGAALNQAKDARLAILDVMAEAITAPSEMSVHAPRIITVKIPVDKIGAVI
GPKGAVINQIQDDTGATLSIEDDGTVYIGATNGEAAEAARSAVNAIANPTMPEIGERYLG
TVVKTTNFGAFVSLLPGKDGLVHITRLKALNGGKRIDNVEDVVEVGQKIQVEIVEIDDRG
KLSLAPVVEDEGSVEADAAADAE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaacctgtcatttctgccgttgagaccgttctggacaacggcaagttcggcaag
cgcaccgtcaagttcgagacgggcctcctggcccggcaggctgccgggtccgtaacggcc
tacctggacgacgagaccatgctgctgtcggccaccaccgcctcgaagcagccgaaggac
cacttcgacttcttcccactcacgatcgacgtcgaagagcgtatgtacgccgccggcaag
atcccgggctcgttcttccgctccgagggtcgccccggcgaggacgcgatcctcacctgc
cgcctcatcgaccgtccgctgcgcccgaccttcgtcaagggcctgcgcaacgaggtccag
gtcgtcatcaccgtgatggcgctcgacccgaaccagccgtacgacgtgctcgcgatcaac
gccgcgtcggcctccacccaactcgccggccttccgttctccggcccggtcggtgccacc
cgcgttgccctcatcgagggtcagtgggttgccttcccgacgcacagccagcttgaggac
gccgtcttcgacatggtcgtcgccggtcgtgtcaccgagaccggtgacgtcgcgatcatg
atggtcgaggccgaggcgcccgagcaggcgtgggacctcatccagggcggcgcgcaggcc
ccgaccgaggcgatcgtcgccgccggtctggacgcctcgaagccgttcatcaagcagctc
tgtgaggcccaggccgagctcgccaagcaggcggcgaagccggtcggcgagttcaaggtc
ttcctggactaccaggacgacgtctatgccgccgttgacgccgccgtcggtgacgatgtc
cgcgcgctctacagcgcatcgaacgggctcgacaagttggcccgcgaggccaagggcgac
gacatcaaggccgcgctgctcgacaagatcggcgctgacttcgagggtcgcgagggcgag
atcggtgcggcgttcaagtcggtcaccaagcaggccatccgtacgcaggtcctgcgtgac
aaggtccgcatcgacggccgcggtctggccgacatccgcccgctgcacgccgaggtctcg
gtgatcccgcgggtgcacggttcggcgctgttcgagcgcggcgagacccagatcctgggc
gtcaccactctcgacatgctcaagatggagcagcagctcgacaccctgtcgccggagaag
caccggcgctacatgcacaagtacatcttcccgccgttctccaccggtgagaccggtcgc
gtcggttcgccgaagcgtcgcgagatcggtcacggtgcgctcgcccgtcgcgcgctcctg
ccggtgctgccgtcgcgtgaagagttcccgtacgcgatccgtcagctctccgaggcgatg
ggctccaacggctccacctcgatgggttcggtctgcgccagcacgctgtcgctcctcgag
gcgggcgttccgctgaaggctgcggtcgccggcatcgcgatgggcctgatctcgggcgag
gtcgacggccagactcagtacgtcgcgctcaccgacatcctcggtgccgaggacgcgttc
ggcgacatggacttcaaggtcgccggtacctccgagttcgtcactgcactgcagctcgac
accaagctcgacggcatcccggcgtcagttctgggtgccgccctgaaccaggccaaggac
gcgcgtcttgcgatcctcgacgtgatggccgaggccatcacggccccgtcggagatgtcg
gtgcacgcgccgcgcatcatcacggtgaagatcccggtcgacaagatcggtgcggtcatc
ggcccgaagggcgcggtcatcaaccagatccaggacgacacgggcgcgaccctgtcgatc
gaggacgacggcacggtctacatcggtgcgaccaacggcgaggcggccgaggccgctcgc
tccgcggtcaacgcgattgccaacccgaccatgccggagatcggcgagcgctacctgggc
actgtcgtgaagaccaccaacttcggtgccttcgtctcgctgctcccgggcaaggacggc
ctggtgcacatcacccggctcaaggccctcaacggtggcaagcgcatcgacaacgtcgag
gacgtcgtcgaggtcggtcagaagatccaggtcgagatcgtcgagatcgacgaccgcggc
aagctctcgctcgccccggtggtcgaggacgagggttcggtggaggctgacgccgccgct
gacgctgagtga
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