KEGG   Nocardioides baekrokdamisoli: Back2_27760
Entry
Back2_27760       CDS       T06654                                 
Name
(GenBank) RNA-splicing ligase RtcB
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
nbe  Nocardioides baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:nbe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nbe03016]
    Back2_27760
Enzymes [BR:nbe01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     Back2_27760
Transfer RNA biogenesis [BR:nbe03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    Back2_27760
 Prokaryotic type
   tRNA splicing ligases
    Back2_27760
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: BBH18489
UniProt: A0A3G9J647
LinkDB
Position
complement(2805744..2806913)
AA seq 389 aa
MENVTKTLKNWASILEDKTREQAMTTATMPFIHPHVALMPDAHLGLGATVGSVIPTLGAI
IPAAVGVDIGCGMIAVRTQYAARDLPSDRRPLRQAIERAVPLSAGASNNKISRAHTEERL
AELTTLAEQAEFEPGAYAKRWDLQLGTLGSGNHFIEVTVDETDQVWLFLHSGSRGVGNRI
AQKHIKVAQDLCAKWWIQLPDRDLAYLVEGTDEFWAYIREMRWAQRYALLNREEMMDRVV
RQFSEWVGGEVDRLEEINCHHNYTEQEHHFGKDVWLSRKGAINAEVGRAGLIPGSMGTAS
YVVSGLGNALSLNSAPHGAGRNYSRSAARRAFTQDDLREAMQGIEYRDTSAFIDEIPAAY
KDIDQVMADAVDLVEIRHTLRQIVNVKGD
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggagaacgtcacgaagacgctcaagaactgggcgtcgatcctggaggacaagacccgc
gagcaggccatgacgacggcgacgatgccgttcatccacccgcacgtggccttgatgccg
gacgcccacctgggcctcggcgcgaccgttggttcggtgatcccgacactcggcgcgatc
atcccggccgccgtcggagtcgacatcggctgcggcatgatcgccgtgcgtacgcagtac
gcagcgcgcgatctgccgtctgatcgtcgaccgcttcggcaggcgatcgagcgggccgtc
ccgctctcggccggcgcgtcgaacaacaagatcagccgcgcccacaccgaggagcgcctg
gccgagctgacgacactcgccgagcaggcggagttcgagcccggtgcgtacgcgaagcgg
tgggacctccagttgggcacgctcggttccggcaatcacttcatcgaggtgaccgtcgac
gagaccgaccaggtgtggctgttccttcactccggatcccgtggcgtcggcaaccggatc
gcgcagaagcacatcaaggttgcgcaggacctgtgcgcgaagtggtggatccagttgccg
gaccgcgacctggcgtacctggtcgagggcaccgacgagttctgggcgtacatccgcgag
atgcgatgggcgcagcggtacgcgttgctcaaccgcgaggagatgatggaccgggtggtc
cggcagttctccgagtgggtcggcggggaggtggatcggctggaggagatcaactgccac
cacaactacaccgagcaggagcaccacttcggcaaggacgtgtggctctcccgcaagggc
gcgatcaacgccgaggtcggccgagccggtctgatcccgggatcgatgggcacggcgtcg
tacgtggtctctggtctgggcaacgcgctctcgctgaactcggcaccgcacggtgccggc
cggaactactcccggtcggctgcccggcgcgcattcacccaggacgacctgcgtgaggca
atgcagggcatcgagtaccgcgacaccagcgcgttcatcgacgagatcccggcggcgtac
aaggacatcgatcaggtgatggcggacgccgtcgacctggtcgagatccggcacacactg
cgacagatcgtgaacgtcaagggcgactga

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