Nocardioides baekrokdamisoli: Back2_28400
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Entry
Back2_28400 CDS
T06654
Symbol
virS
Name
(GenBank) HTH-type transcriptional regulator VirS
KO
K28158
AraC family transcriptional regulator, mymA operon recgulator
Organism
nbe
Nocardioides baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
nbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nbe03000
]
Back2_28400 (virS)
Transcription factors [BR:
nbe03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Back2_28400 (virS)
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GFIT
Motif
Pfam:
Arabinose_bd
HTH_18
HTH_AraC
HTH_23
HTH_8
Thump_like
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
BBH18553
UniProt:
A0A3G9J1L8
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Position
complement(2870430..2871485)
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AA seq
351 aa
AA seq
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MEASVGGLIRATNIRGYDALVRELGGDPRSLRRRFGLPREDQTTDESFVPYAPMAWMLQT
TADELDCPDFGLRLSAWQGLGILGPIAVVARNTETILEAFVAIGRYLHAHSPVLHLSPVG
PYDPGHQQGLIAFNYSIEEPGLPYLPQTYELSLGNGMQILRMLSGPEVPHGSLAFRHAQV
GPWSTYAEVLGPSVEFEQDWCGFSISEVYAATPIDNADPATLRIATQYLEASFHPGADLS
APVADLIRRLLPTGTCQADAVAHHLGLHARTLQRRLAEEGTSFAALVERERSEQAARMLA
NPGLQLRQIAALLGYTEQSTFNRSFRRWYRTTPRAFRASQTDIPGVRSGHA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgagcgtgggcggactgatccgggcgaccaacattcgtggatacgacgcgctc
gtccgcgaactcggtggggatccgcgatcgctgcggcgccgattcggcctcccgcgcgag
gaccagacgaccgacgagtcgttcgtcccgtacgccccgatggcctggatgctccagacg
accgcggacgaactggactgtccggatttcgggttgcgactcagcgcttggcaggggctc
ggaatcctcggcccgatcgcggtggtggcccgcaacaccgagaccatcctggaggcgttc
gtcgcgatcggacgctacctgcacgctcactccccggtcctgcacctcagccccgtcggc
ccgtacgaccccggccaccagcaggggttgatcgcgttcaactactcgatcgaggagccc
gggctgccgtacctcccacagacgtacgaactcagcctcgggaacgggatgcagatcctc
cgcatgctctcgggcccggaggtgccgcacgggtcattggcgttccggcatgcccaagtc
ggcccctggtcgacctatgccgaggtcctcggcccctcagtggagttcgagcaggactgg
tgcggcttctccatcagcgaggtgtacgccgcgacgccgatcgacaatgccgacccggca
acgctgcggatcgccacgcagtacctggaggcgtcgttccatcccggcgctgacctctcg
gcccccgttgccgacctgatccgcaggctcctgccaaccgggacgtgtcaggccgacgcc
gtcgcccaccacctcggcctgcacgctcgaacgctgcaacgccggctggctgaggaaggg
acctctttcgcggcgctcgtggagcgcgaacgttccgagcaggcagcccggatgctcgca
aacccgggactgcaactacgacagatcgcggctctcctcggatacaccgagcagagcacg
ttcaaccgctccttccggcgctggtaccgcaccactccgcgcgccttccgcgcgagccag
accgacatacccggagtacgctccggacatgcgtga
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