Natronorubrum bangense: DV706_08005
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Entry
DV706_08005 CDS
T05942
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
nbg
Natronorubrum bangense
Brite
KEGG Orthology (KO) [BR:
nbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nbg03019
]
DV706_08005
Messenger RNA biogenesis [BR:
nbg03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
DV706_08005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
QCC55866
UniProt:
A0A4D6HRE6
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All DBs
Position
1611424..1613490
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AA seq
688 aa
AA seq
DB search
MSKQVQQVETIFCHEIGDDYLVVVERDGQRLFRAKLGLSETSAGPRPAKFRLKDGSSEEP
RQPDEFIELARRSKRIRISEQTSKQGREELMEMLSGYQLEDKAKAVRTCRYCASAGRYSP
ITTETAVKDDNDWICQDCARQELERQLSYSGGGAVTGAAKDRLEELMLEVQDLERIVNLL
KGQLDPDLTKFDTISATTDEVDPVRVDSLNLHPGLQGLLEDRFETLLPVQSLAVENGLFD
GEDQLVVSATATGKTLVGEMTGLNRVLNGKGKMLFLVPLVALANQKYEDFQDEYGHLVDV
SIRVGASRISDNGNQFDPNADVIVGTYEGIDHALRTGKNLGDIGTVVIDEVHTLKEDDRG
HRLDGLISRLKYTCEQRAKRRDDYGGAQWVYLSATVGNPEQLGAALESTLIEFEERPVPI
ERHVTFADGQEKVRIENKLVRREFDTESSKGYRGQTIIFTNSRRRCHEISRKLEYSAAPY
HAGLDYRRRKKVERQFGEQELSAVVTTAALAAGVDFPASQVIFDSLAMGIEWLSVQEFHQ
MLGRAGRPDYHDKGTVYVLVEPDCAYHNSMEMSEDEVAFKLLKGDMESVMTHYDEAAAIE
ETLANITVSGKAAKGLNDRMLGDVPTKHAIGKLLQYDFIDGFEPTPLGRVVTEHFLEPSE
AFMLVDGIRKDAHPYELVADIELRDADL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaagcaggtccagcaggtcgaaacgatcttttgtcacgagattggcgacgactat
ctcgtggtggtcgagcgcgacggacagcgactgttccgggcaaaactcggactgtcggaa
acctcggccggccctcgtcccgcaaagttccggctcaaagacggctcgagcgaagagcca
cgccagcccgacgagttcatcgaactcgcccggcgatccaagcggattcgaatctccgag
cagacctcgaagcagggccgcgaggaactcatggaaatgctcagcggctaccagctcgag
gacaaggccaaggccgtccgaacctgtcggtactgtgcctccgcaggccggtattcgccg
attacaaccgagacggccgtcaaagacgacaacgactggatctgccaggactgtgcgcgc
caggaactcgagcgtcaactgtcgtactccggtggcggcgcagtcaccggcgcggccaaa
gaccgcctcgaggagctcatgctcgaggtgcaggatttagaacggatcgtcaacctgctg
aaaggccagctcgatcccgacctgacgaagttcgataccatctcggcgacgaccgacgaa
gtcgatcccgttcgggtggactcgctgaacctccatcctggcttacagggactgctcgag
gaccgcttcgagaccttgctcccggtccagagtctcgccgtcgagaacgggctgttcgac
ggtgaggaccagctcgtggtgtcggcgacggcgaccgggaaaaccctcgtcggcgagatg
accggtctcaaccgtgtgttgaacggcaaggggaagatgctctttctcgttcccctcgtc
gcgcttgcaaatcagaagtacgaggactttcaagacgagtacggccacctcgtcgatgtc
tccattcgtgtgggtgcgagccggatctcggacaacggcaaccagttcgaccccaacgcc
gacgtgatcgtcggcacctacgaggggatcgaccacgccttgcggactggcaagaatctg
ggagatatcggaaccgtcgtcatcgacgaagtccacacgctcaaagaggacgatcgtggc
caccgactcgatggcctcatttcacggctcaaatacacctgcgaacaacgtgcgaaacga
cgcgacgactacggcggcgcgcagtgggtctatctctcggcgaccgtcggcaaccccgaa
cagctcggcgcggcactcgagtcgacgctcatcgaattcgaggagcggccggtgccgatc
gaacggcacgtcacgttcgctgacggccaagaaaaagttcggatcgaaaacaaactcgtc
agacgcgagttcgatacggagtcctcgaaagggtatcgcggccagacgatcatctttacg
aactcgagacggcggtgtcacgagatcagtcgaaaactcgagtactccgctgcgccgtat
cacgccggcctcgattaccggcgccggaaaaaagtcgaacggcagttcggcgaacaggaa
ctctccgccgtcgtcacgactgccgccctcgccgcgggggtcgacttcccggcctcacag
gtgatcttcgactcgctggcgatggggatcgagtggctttcggtccaggagttccaccag
atgctcggccgtgcgggtcggccagactaccacgacaaagggacagtgtacgtcctcgtc
gaacccgactgtgcctatcacaactccatggaaatgagcgaagacgaagtcgcgttcaaa
ctgctgaaaggcgacatggagtcggtgatgactcactacgacgaggccgccgcgatcgag
gaaacgctggcgaacattactgtcagcgggaaagccgccaagggactcaacgaccgcatg
ctcggcgacgtgccgacgaaacacgcgatcggcaaactcctgcagtacgacttcatcgat
ggcttcgaacccacgccgctgggccgtgtcgtcactgaacacttcttagagcccagtgaa
gcgttcatgctcgtcgatggtatccgaaaagacgcccacccctacgaactcgtcgcggat
atcgaactgcgcgacgcggatctgtag
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