Natronorubrum bangense: DV706_09315
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Entry
DV706_09315 CDS
T05942
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
nbg
Natronorubrum bangense
Pathway
nbg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DV706_09315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbg03400
]
DV706_09315
DNA repair and recombination proteins [BR:
nbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DV706_09315
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DV706_09315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
ATPase
AAA_23
AAA_15
AAA_22
RsgA_GTPase
AAA_14
DnaJ_CXXCXGXG
nSTAND3
AAA_21
cobW
NACHT
Viral_helicase1
NMDAR2_C
DUF87
Motif
Other DBs
NCBI-ProteinID:
QCC54649
UniProt:
A0A4D6HL30
LinkDB
All DBs
Position
complement(1856117..1859080)
Genome browser
AA seq
987 aa
AA seq
DB search
MSKEYITVRGAEEHNLKDLDVTIPREEFTVVTGLSGSGKSSLAFETIYAEGQRRYIESLS
AYARNFLGQMDKPQVETVEGLSPAISIDQKNAANNPRSTVGTVTELHDYLRLLYARVGTP
HCPDCGREVGEQSAQNMVERILELPEGTKAKLAAPVVRDQKGAFEDLFDELVSEGYARVE
VDGEEHDLTLEKPDLDENFDHTIDVIVDRVKVSVEDRPRIIDSVETALEEAEGVLKVILP
DASEEVAADLGEEARQTGALGDKTNDDDRFVVEFSKDLACTHCGIDVPEIETRSFSFNSP
HGACPECEGLGETKEVDEDLVIQDASKPLKHVFEPWSYNRSYYQTRLDSVAAHFDIPLST
PFEEIDADIQQAFLYGTNDEVVFKRQTKNGTRRKQKRFEGVIPNLERRYLETDSDSTREH
IEDYMSVTECPACDGTRLKPASRAVLVDDTSITEINAMSIGDALAHFESMEADLTEREKV
IAEEILKEIRSRLSFMCEVGLEYLTLDREASTLSGGESQRIRLATQIGSGLVGVLYVLDE
PSIGLHQRDNDRLLDTLAELRDLGNTLLVVEHDEETMRRADQVVDMGPGPGKRGGEVVVN
GSVEELKACEDSVTGDYLSGRRQIPVPDERRDPDGALTIRGARQHNLGDVDVDIPLGNFT
AITGVSGSGKSTLMHEVLYKGLARKMNNNTSVIPGDHDALKGLEEIETVRLIDQSPIGRT
PRSNPATYTNVFDYIRELFASTKLAKQRGYEKGRFSFNVKGGRCEECGGQGTVKIEMNFL
SDVYVPCEECDGARYNDATLDVTYKGKTIADVLDMEVEEAYDFFESSSQIRRRLQLLKDV
GLGYMTLGQPSTTLSGGEAQRIKLAEELGKKDSGETLYLLDEPTTGLHSEDERKLIDVLH
RLTDNGNTIVVIEHELDLVKNADHVIDLGPEGGENGGEIVATGTPEEIARLEDSHTGRYL
RDLLPKVDLEGPRGERVEPVTAPMDDD
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggagtacatcacggttcggggtgcagaggaacacaacctcaaggacctcgac
gtgacgatcccccgtgaggagtttaccgtcgttaccggcctctcgggctcgggcaagtcc
tcgctggcgttcgagacgatctacgccgaaggccagcgccgctacatcgagagtctctcc
gcctacgcccgcaacttcctcgggcagatggacaaaccgcaggtcgagaccgtcgaaggg
ctctcgccagcgatctcgatcgaccagaaaaacgccgcgaacaacccccgatcgacggtg
ggaacggtgacggaactccacgactatctccggctcctctacgctcgcgtcggcactccc
cactgcccggactgtggccgtgaggtcggcgagcagtcggcccagaacatggtcgaacgc
atcctcgagctccccgagggaaccaaggccaaactcgccgcccccgtcgttcgcgaccag
aagggggcgttcgaggatctgttcgacgaactggtctcggaggggtacgcccgcgtcgaa
gtcgacggcgaggaacacgacctcacgctcgagaaacccgacttggacgagaacttcgat
cacacgatcgacgtcatcgtcgaccgcgtgaaagtcagcgtcgaggaccgcccgcggatc
atcgacagcgtcgagacggccctcgaagaggccgaaggcgtcttgaaggtcatccttcca
gatgcctccgaagaggtcgccgcagatctgggcgaggaagcccgccagacgggcgcgctg
ggcgacaaaaccaacgacgacgaccgcttcgtcgtcgagttttcgaaggatctggcgtgt
acccactgtgggatcgacgtccccgagatcgagacgcgctcgttttcgtttaattcgccc
cacggagcctgtcccgagtgtgaggggttaggcgagactaaagaggtcgacgaggacctc
gtcatccaggacgcttccaagccgctgaaacacgtcttcgaaccctggagctacaaccgg
tcgtactaccagacccggctggattccgtcgcagcgcatttcgacatcccgctgtcgaca
cccttcgaggagatcgacgcggacatccagcaagcgtttctctacggcacgaacgacgaa
gtcgtcttcaagcgacagacgaaaaacggcacccggcgaaaacaaaagcgcttcgagggc
gttatcccgaacttagagcggcggtatctcgagaccgactccgactcgactcgcgaacac
atcgaggactacatgtcggtcacggagtgtccggcctgtgatggcacgcggttgaagccc
gcgagccgggccgtgctcgtcgacgacacctcgatcaccgagatcaacgcgatgagtatc
ggcgacgccttagcgcacttcgagtcgatggaagccgacctcaccgagcgcgagaaggtg
atcgccgaggagatattaaaggagattcgctcacgactcagcttcatgtgtgaggtcggc
ctcgagtatctcacgctcgaccgagaggcctccaccctgtcgggcggcgagagtcagcgc
attcggctggcaacacagatcggttccggactcgtcggcgtcctctacgtgctcgacgag
ccctcgatcgggctccaccagcgagacaatgaccggctgcttgatacgctggcggaactg
cgtgatttgggcaacaccctgctcgtcgtcgaacacgacgaggagacgatgcgtcgtgcc
gaccaagtcgtcgacatggggcctggtcccggcaaacgcggcggcgaggtcgtcgtcaac
ggctccgtcgaggagctcaaagcctgcgaggactccgtcaccggcgactatctctccggc
cgccggcagatccccgtccccgacgagcgccgcgatcccgacggggcgctgacgattcgc
ggggcgcgccagcacaacctgggcgacgtcgacgtcgacatcccgcttggcaacttcacc
gcgatcacgggcgtctcgggctccggaaaatcgacgctgatgcacgaggtactctacaaa
ggcctcgcccgcaaaatgaacaacaacacgagcgtgattccgggcgaccacgacgccctc
aagggactcgaggagatcgaaaccgtccgcctgatcgatcagtcgccgatcggccgcacg
ccacggtcgaacccggcgacgtacacgaacgtcttcgactacatccgggagctgttcgcc
tcgaccaaactcgcgaaacagcgcggctacgagaaggggcggttctcctttaacgtcaaa
gggggccgctgtgaggagtgtggcgggcagggaaccgtcaagatcgagatgaacttcctc
tcggacgtgtacgtcccctgtgaggagtgtgacggcgcacgctacaacgacgccacactc
gacgtcacctacaaggggaagaccatcgcggacgtcctcgatatggaagtcgaagaggcc
tacgactttttcgagtcctcgagtcagatccgtcgccgactccaactgttgaaagacgtc
gggctgggctatatgacgcttggacagccctcgacaaccctctccggcggtgaggcccag
cggatcaaactcgccgaagaactcgggaagaaagattcgggtgagacgctctacttactc
gacgagccgacgacgggacttcacagcgaggacgagcgcaagctgatcgacgtcctccac
cggttgaccgacaacggcaacaccatcgtcgtcatcgaacacgaactcgatctcgtgaaa
aacgccgaccacgtcatcgacctcggccccgagggcggcgagaacggcggcgaaatcgtc
gccaccggcacacccgaggagatcgcccgcctcgaggactcccacactggtcgctatctg
cgtgatctgttgccgaaagtggatctcgaggggccacgcggcgagcgcgtcgaacccgtg
acggcgccgatggacgacgattga
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