Natronorubrum bangense: DV706_11060
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Entry
DV706_11060 CDS
T05942
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
nbg
Natronorubrum bangense
Pathway
nbg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nbg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
DV706_11060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nbg03021
]
DV706_11060
03019 Messenger RNA biogenesis [BR:
nbg03019
]
DV706_11060
Transcription machinery [BR:
nbg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
DV706_11060
RNA polymerase I system
DV706_11060
Messenger RNA biogenesis [BR:
nbg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
DV706_11060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
DUF6093
Ribosomal_uL24m-like
KOW4_SPT5
SH3_KIN17_C
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
QCC54957
UniProt:
A0A4D6HQL5
LinkDB
All DBs
Position
2208641..2209078
Genome browser
AA seq
145 aa
AA seq
DB search
MGIYAVKTTASQERTVADMIINREEPEIHAALAPDSLTSYVMVEAEGNNVLSRVLEDIPH
AQSIVPGTSDITEVEHFLSPKPDVEGIAEGDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSDER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgggcatttacgcagtcaagaccacggcgagtcaggagcgcaccgtggcagatatgatc
atcaaccgcgaggagccagagattcacgctgcactcgctcccgattcgctgacctcctac
gtgatggtcgaagccgaggggaacaatgtgttgagccgtgtcctcgaggacattccccac
gcccagagtatcgtccccggcacctccgacattacggaagtcgagcacttcctctcgccg
aaaccggacgtcgaagggatcgccgagggagacatcgtcgaactcatcgctggcccgttc
aaaggcgagaaagcccaggtccagcgcatcgacgaaggtaaagatcaggtgacagtcgaa
ctgtacgaggccacggttccgattccggtgacagtgcggggcgatcagatccgcgtgctt
gacagcgacgaacgatag
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