Natronorubrum bangense: DV706_17540
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Entry
DV706_17540 CDS
T05942
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
nbg
Natronorubrum bangense
Brite
KEGG Orthology (KO) [BR:
nbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nbg03000
]
DV706_17540
Transcription factors [BR:
nbg03000
]
Prokaryotic type
Helix-turn-helix
Other families
DV706_17540
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BAT
PAS_9
PAS
GAF_2
HTH_10
PAS_8
PAS_4
GAF_3
PAS_3
GAF
PAS_7
Sigma70_r4
HTH_20
HTH_11
HTH_24
Sigma70_r4_2
DUF134
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QCC56342
UniProt:
A0A4D6HT18
LinkDB
All DBs
Position
unnamed1:420769..424131
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AA seq
1120 aa
AA seq
DB search
MLIFARVFTFIYISVLSIYVGETRSTHMVNSSSLVDESFLSEVIAGVPYGILALNETGVV
VFATPSTERLLGYTPEELVDRSIEGLFSGDRSSLLEQFRHEANTTTSGGSEIPLSLVDNR
GDDVPVWLSVTEAMYDDQRYYTLTLREGVAEHPRNRRSSRDEQPLERIVEQAIDGIVVVD
LEADDIVECNRQFCDMLGYQYEELMSLDPGDLFHDELDWVRERIEQDLTEAAGWNGDLAY
DTRSGDAISTETFVSQIEVDDRPFLLATVRSSTRRNTYERQLKALNDASRRLMDADTAHD
IGDVVLEVVQTVFGRSLTALWLYEQNNDVLRPLAASEKVSSLSSGSAIDAIGPITSETTE
MEIFRDGESELLEAYDDVDNPAHPEMSLKSLLVVPLGGYGLLAIGSTTVEDIDRSLRDLV
DILAQTTQTAFKRLDHDQAIRHRSAAIDAATDSIGISNHHGEFTYANDALADLWGYDETD
DLIGTTWDRLYADDEIERFESDILPVVQQQGQWRGEAVGKRTDGTTFPQEISLSALDNGG
LVCVIRDITDRKSQEQQLEMLNEVAHELMKVHSREEIAEIGVDAIENVLGFEVACFRLLN
HEKSILEPAVLTTGAERLVTSHIAYDLEATLAGRAFRVSEPVSTIPLSGEFGRSSPVEYP
SVHIPVGTHGVVSIIVEDDDEVDDRDIRLADILAVAVRTAIERTEQTQLLKEQEHELRQQ
RDQLETLNRINTLIQLIEKKLVEATTRSELESTICEQLAASELYSSAWIGDAEVTTDRIA
ARAGSGIADADLKAINETPLSSLGNGTVERALETGDITVIRQYRLEGGVTDTDSDDQDRQ
VETTAAVPIIYGDRIYGVMVVHGTNEDVFGEKAVRGFELLGQITGFAISAIQNRKILLSD
SVVELEFEVADPRVFCLNVTKELDCQCKLERSIPIDEGKFMHYHTITGAKPADVLELAAE
ADHVEDATAVAKRDDGFVLQSVTPEAPAETALQAGATYQSAVAKDGRGRLVVEAPQSADI
REIVAQLEEGFSTVDLRSKRERERSIHTADEFRDVVDAQLTEKQRTTIESAYFSGYYDWP
REITAEELADSMGVSSSTLHQHLRNGTRHLLSAFFQDQDK
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgcttatatttgcacgtgttttcaccttcatttacatttcggtgttgtcgatttatgtt
ggtgaaacacgtagcactcatatggttaacagctcctctctggtcgacgaatcgtttctg
tctgaggtgatagctggagtgccatacgggattctcgcactcaacgaaaccggggtggtt
gtcttcgctactccttcgaccgagaggttgctgggctacacgccagaggagctcgtcgat
cgttctatcgaaggactgttttcgggagatcggtcatcgctgctcgaacagttccgtcac
gaggcgaacacgacgacgtctggcggttccgagatcccgctctcgcttgtcgataatcgc
ggtgacgatgttcccgtctggctctccgtaaccgaagcgatgtacgacgaccaacgatat
tatacgctcacactccgggaaggtgtggcggaacacccccggaaccgacggtccagcagg
gacgaacaacccttagaaagaatcgtcgagcaggcgatcgacggaatcgtcgtggtcgat
ctcgaggcagacgacatcgttgaatgcaaccgccagttctgtgacatgctgggctaccaa
tacgaagagctgatgtcactcgatccgggcgatcttttccacgacgaactcgactgggtt
cgtgagcgtatcgagcaggatctcacggaagcagccgggtggaacggcgacctagcgtac
gacacacgcagtggcgacgccatatcgaccgaaacgttcgtttcacaaatcgaagtcgac
gaccgaccgttcctgctcgcgacggtccgtagcagcacaagacggaacacgtacgagaga
cagctaaaggcactcaacgacgccagtcggcgactaatggacgccgatacggcccacgat
atcggcgatgtggtcctcgaggttgtccagactgtattcggacggtcgctcactgcactg
tggctctatgagcaaaataacgacgttctgcgtccgctggccgcgagcgaaaaggtatca
tccctatcaagtgggagtgcgatcgacgcgatcggcccgatcacgtcagagacgaccgag
atggaaattttccgggatggcgagtccgaactgctcgaagcgtacgacgatgtcgacaat
cctgcacaccccgaaatgtcattgaagtcattactcgtggttccactcggaggctacgga
ctgcttgcaatcggatcaacgacggtagaagacatcgaccgatcgctccgggatctcgtc
gacatcctcgcacagacgacgcaaacagcgttcaaacgtctcgaccacgatcaggcgatt
cgtcaccgttctgcggcgattgacgctgcaaccgatagtatcggtatcagtaaccaccac
ggcgagttcacgtacgcaaacgatgcgttggccgacttatggggatacgacgagactgac
gatctcattggaacaacgtgggaccgcctctacgctgacgacgagatcgaacgcttcgaa
tcggacatccttcccgtcgtccagcaacagggacagtggcgaggagaagcagtcggtaaa
cggaccgacggaacgacatttccacaggaaatctcactcagtgcgctcgacaacggtgga
ctagtgtgtgtcattcgagatattacggaccgaaaatcgcaggaacagcaactggagatg
ctcaacgaggtggcacatgagctgatgaaagtccactctcgagaggaaattgccgagatc
ggtgtcgacgccatcgagaacgttcttggcttcgaggtcgcctgttttcgcctgctcaac
cacgagaaatcgatactcgaaccagccgtgttgacgacaggagccgagaggctggtcaca
tctcacatcgcgtacgatctcgaagctacgctcgccggacgtgcatttcgggtctcagaa
cccgtatcgactattccgctgtccggcgagtttggccgttcctcgccggtcgagtatcca
agtgttcatatcccagtcggaacgcacggtgtcgtgagcatcatcgtcgaagacgacgat
gaggttgacgaccgcgatattcgccttgctgatatattggcggttgccgtgcggacggca
atcgagcggaccgaacagacccaactgctcaaagaacaggagcacgaattacgccagcag
cgcgaccagctcgagacgctgaaccgaatcaatacccttattcaactgatcgaaaagaag
ctcgtcgaggcaacgactcgatccgaactggaatcgacaatctgtgaacagctggcagca
tccgaactgtacagtagcgcgtggatcggtgacgctgaagtgaccactgatcgaatcgca
gcgcgtgccggttccggaatcgcggacgctgacctcaaggcgatcaacgagacgccgctc
tcgagtctcggaaacgggaccgtcgaaagagcgctcgaaacgggagacatcacggtcatc
agacagtaccgtctcgagggaggcgtgaccgacaccgattcggacgatcaggacaggcag
gtcgagacaacggctgcagttcccattatttacggtgatcggatatacggcgtgatggtg
gttcacggcactaacgaggatgtgttcggcgaaaaagcggttcgagggttcgaactgctc
gggcaaataaccggcttcgcaataagtgcaatacagaatcggaagatcctgctctccgat
tcggtcgtcgaactcgagttcgaggtcgcggatccacgggtgttttgtctcaacgtgaca
aaagaactcgactgccaatgcaagctcgagcggtcaattcccattgacgagggaaaattc
atgcactaccacacgattactggtgcaaaaccggcggacgtcctcgaactcgcggccgag
gctgaccacgttgaggacgcgacggcagttgccaaacgcgatgatggattcgtcctccag
tcggtcacgccggaagccccagccgaaacggcgttgcaagccggggcaacctatcaatcg
gccgtggccaaagacggcaggggacgattggttgtcgaagcgccacagtccgcggatatc
cgcgaaatcgtcgcccagttagaagaggggttttcgaccgtggacctccgatcgaagcga
gagcgtgagcgctcgattcatactgccgatgagtttcgcgatgtcgtcgatgctcaactt
accgaaaaacagcggacaacgatcgagtcggcgtacttttcagggtactacgactggccg
cgcgagatcacggctgaggaactagccgactcgatgggtgtctcgtcttcgacgctccac
caacaccttcggaacggtactcggcaccttctctctgctttctttcaggatcaggacaag
tga
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