KEGG   Natronorubrum bangense: DV706_20160
Entry
DV706_20160       CDS       T05942                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
nbg  Natronorubrum bangense
Brite
KEGG Orthology (KO) [BR:nbg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nbg03400]
    DV706_20160
Enzymes [BR:nbg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DV706_20160
    5.6.2.6  RNA 3'-5' helicase
     DV706_20160
DNA repair and recombination proteins [BR:nbg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    DV706_20160
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII AAA_25 DUF4379 Zn_ribbon_PaaD
Other DBs
NCBI-ProteinID: QCC56851
UniProt: A0A4D6HTI0
LinkDB
Position
unnamed2:151115..153946
AA seq 943 aa
MTDGDVAAFTHLGSTVRGALSERGFSRPTPPQQLAIPPLSAGQQTLVIAPTGSGKTETAM
LPVFDHLLEDPPEGFGALYVTPLRALNRDMRERLEWWGEYLDLAVDVRHGDTTQYQRGKQ
AENPPDVLVTTPETLQAMLTGERLRGALQDVSHVVIDEVHELAASKRGAQLAVGLERLQD
LAGPIQRIGLSATVGDPDEVGQFLTGGRPCEIREIDVGSNIDVTVREPEITDEDERLAGE
LMTEPDTASHVRLIRNLVAKHESTLIFVNTRQTAEALGSRFTELDLPIGVHHGSLSKEAR
IDVEDRFKAGDLEGLLCTSSMELGIDVGRVDHVIQYQSPRQVTRLLQRIGRAGHRQDAVS
SGTIVTTRPDDTLEAVAIARRARDGEVEPAAIHEGSLDVVANQIPGFVQSRGSTPLCEAY
ETVTRAYPFRDLPEETFREVVSELHRNRIVWFDESEDSLGATGGTWQYVYANLSMIPDEE
SYEVHDIASSTQIGTLDERFVVNFAQPGEVFIQRGEMWRIAEIDDEECRVKVSPIEDPAG
EVPSWTGQEIPVPAAVAGEVGEIRAVAEPQLSAGADAGAVSRELAHRYPADEYTLTEACG
QLERQLEAEAPMPTVDRLVLERQGRTIVLNAPFGHMINETLGRVLSSLLGQQAGSSVGLE
TDPYRIELEVPTSVATSDVLAVLEDTDPDHVEAIIELGLKRSDALAFRLAQVSAKFGALK
RWQNAGSGRLSNERLLAALEDTPMYEEAVREVFHEDLDVDRASDVLERLQSDELELVTHR
GRTPVGQGGRSSGKELLAPENADASVIKTVKERLQNDRIILLCTHCTEWQAKTKVRRVAD
QPECPDCGSTRIASLNPWADEVVQAVRAEEKDDEQASMTERAYRSASLVQSHGRQAVIAM
AARGVGPHNAARIINKLREDEAEFYRDILSKEREYARTQSFWD
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgactgacggggatgtcgcagcgtttacgcacctcggatcgacggttcgtggggcgctc
tctgaacgcggcttctcgaggccgacgccaccacaacaactggcgattccgccgctgtcg
gccggccagcagacgctcgtgatcgcgccgactggaagtggcaagaccgagacagcgatg
ttgccggtcttcgatcacctgctcgaggacccacccgagggattcggcgcgctctacgtt
actccgctgcgggcgctcaaccgcgacatgcgcgaacgcctcgagtggtggggcgagtac
ctcgacctcgcggtcgacgtccgtcacggcgatacgacccagtaccagcgcgggaagcaa
gcggagaacccaccggacgtgctggtgacgacgcccgaaaccctccaggcgatgctcacc
ggggaacgcctgcggggggccctacaggacgtctcccacgtcgtgatcgacgaggtccac
gaactcgcggcgtcaaaacgcggcgcccaactcgccgttggcctcgagcgcttgcaggat
ctggcggggccgatccagcgaatcggcctctcggcgacggtcggcgatccggacgaagtc
ggccagttccttactgggggtcgaccctgcgagatccgggagatcgacgtcggcagcaac
atcgacgtcaccgtccgcgaacccgagatcaccgacgaagacgaacggctggcgggcgag
ttgatgaccgaacccgacacggccagccacgttcgactgatccggaacctcgtcgcgaaa
cacgagtcgacactgatcttcgtcaacacgcgtcagacggcggaagcacttggctcgaga
ttcaccgaactcgacttaccgatcggcgtccatcacggctcactctcgaaggaggcccga
atcgatgtcgaagaccggttcaaagccggcgacctcgagggcctactctgtacgtcctcg
atggaactggggatcgacgtcggccgcgtcgaccacgtgattcagtatcagagtccccgc
caggtgactcgactcctccagcgaatcgggcgtgcaggccaccgccaagacgcggtctcg
agtgggaccatcgtcacgacccggcccgacgacacgctcgaggcggttgcgatcgcccgc
cgggctcgagatggcgaggtcgaaccggcggcgatccacgaggggagtctcgacgtggtc
gcaaaccagattccggggttcgtccagagccgcggctcgacaccgctttgcgaggcctac
gagacggttacgcgcgcgtacccgttccgtgaccttcccgaagaaacgttccgcgaggtc
gtctcggaactgcatcgcaatcgaatcgtctggttcgatgaaagcgaagactctcttggg
gccacaggcggcacctggcagtacgtctacgccaatctctcgatgatccccgacgaggag
tcctacgaggtccacgacatcgcctcgagcacccagatcgggacgttagacgagcggttc
gtggtcaacttcgcccagcccggcgaggtgttcatccagcgtggcgagatgtggcgcatc
gccgaaatcgacgacgaggagtgtcgcgtgaaagtcagtccgatcgaggatcccgctggg
gaggtgccgtcttggaccggtcaggagatccccgtccctgcggccgtcgccggcgaagtc
ggtgagatccgcgcggtggccgagccacagctgtcggctggcgctgacgctggagccgtc
tcgagggaactcgcccatcgatacccggccgacgagtacacgctcaccgaagcctgcgga
caactcgagcgccagctcgaagccgaggcaccgatgccgacggtggatcggctcgtcctc
gagcgtcagggccgaaccatcgtcctgaacgcgccgtttggacacatgataaacgagacg
ctcggtcgcgtgctctcctcgctgctcggccagcaggctggctcgtccgtgggtctcgag
acggacccctaccggatcgaactcgaggtgccgacctcggtcgcgaccagtgacgtgctg
gccgtcctcgaagacaccgatcccgaccacgtcgaggcgatcattgaactcggactcaag
cgctcggatgcgcttgcgttccgtctcgcacaggtgtcggccaaattcggcgcgctcaaa
cgctggcagaacgccggctccgggcgactgtcgaacgagcgcctgctggcagcgctcgag
gacacgcccatgtacgaggaggcggtccgtgaggtgtttcacgaggatctcgatgtcgac
cgggcgagtgacgttctcgagcgactccagtcagacgagctagagctcgtcactcatcgg
ggccgaacgccggtcggtcagggtggtcgatccagcggcaaagagcttctggcacccgaa
aacgcggacgcaagcgtgatcaagacggtcaaagagcggctgcaaaacgaccgaatcatt
ctgctctgtacccactgcaccgagtggcaggcgaaaacgaaggtcagacgcgtcgctgac
cagcccgagtgtcccgactgtggctccactcggatcgcgtcgctgaacccgtgggccgat
gaggtcgtccaggcggtccgcgccgaggaaaaagacgacgaacaggcgtcgatgaccgaa
cgcgcgtatcggagcgcgagcctcgttcagagccacggcagacaggccgttatcgcgatg
gctgctcgcggtgttggcccacacaacgctgcccggatcatcaacaagctccgagaggat
gaagccgagttctatcgcgacatcctctcgaaagaacgcgagtatgccagaacccaatcg
ttctgggattga

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