Nocardioides bizhenqiangii: SHK19_01195
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Entry
SHK19_01195 CDS
T10239
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi03030
DNA replication
nbi03430
Mismatch repair
nbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHK19_01195
03430 Mismatch repair
SHK19_01195
03440 Homologous recombination
SHK19_01195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbi03032
]
SHK19_01195
03400 DNA repair and recombination proteins [BR:
nbi03400
]
SHK19_01195
Enzymes [BR:
nbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHK19_01195
DNA replication proteins [BR:
nbi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SHK19_01195
DNA repair and recombination proteins [BR:
nbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SHK19_01195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
Rad17
Mg_chelatase
AAA_14
AAA_18
AAA_5
AAA_16
AAA_19
AAA_28
TsaE
nSTAND3
zf-CXXC
RNA_helicase
AAA_2
AAA_24
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
WQQ26861
LinkDB
All DBs
Position
252560..254488
Genome browser
AA seq
642 aa
AA seq
DB search
MDSPLALYRRYRPETFAEVIGQEHVTEPLRAALAGNRVNHAYLFSGPRGCGKTTSARILA
RALNCEQAPVADPCGECDSCRDLARNGSGSIDVIEIDAASHGGVDDARELREKAFFAPVR
SRYKVYIIDEAHMVTTQGFNALLKLVEEPPPHLRFIFATTEPDKVIPTIRSRTHHYPFRL
IPPRLLSSYLSELCELEGVTIEPTALPLVVRAGAGSARDTLSVLDQLLGGAGPAGVTYDL
ASGLLGYTPDTLLDGVVDAFAAGDGASVFGVVDKVIETGQDPRRFTEDLLRRLRDLVIVS
AVPDAPATGLIDVSGDQAERLVTQAARFGRAELTRAADLVAAGLTEMRGATAPRLLLELI
CARVLLPAADHGTDGVLARLDRLERRMAIVGTPATPEAPPPADAPQRAAAPAPAAEAPAP
APTVEAPAPAAEAPAPVPTEPEPEPSAPPAAPAAAAAPAPPEPAAAPASPSTPGTMSLGD
VRGLWPTVIDACRSLRKATWSLIGQNAQVVDFDGTVLTLGFPSSGLRDQFLGGGHEPVLL
EAMTKAIGLQPRIDAIVHQGASAASPAPTAAPAPVPEPDPPAEPAPPPPRRPRMADIQAE
PADLHDPDSAVDRDDADVDAESGADLLVRELGAQVIEETPHQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
gtggattccccgctcgcgctctaccgccgctaccggccggagaccttcgccgaggtcatc
ggccaggagcacgtgaccgagccgctccgcgccgcgttggcgggcaaccgggtcaaccac
gcctacctgttctccggcccgcgggggtgcggcaagaccacgagcgcccggatcctggcc
cgtgccctcaactgcgagcaggcgcccgtcgccgatccctgcggcgagtgcgacagctgt
cgtgacctggcccgcaacggctccgggtcgatcgacgtgatcgagatcgacgcggcgtcg
cacggtggtgtcgacgacgcccgcgagctgcgggagaaggcgttcttcgcgccggtgcgg
agccgctacaaggtctacatcatcgacgaggcgcacatggtgaccacgcagggcttcaac
gccctgctcaagctggtcgaggagccgcctccgcacctgcggttcatcttcgccacgacg
gagccggacaaggtgatccccaccatccggtcacgcacccaccactacccgttccgcctg
atcccgccacggctgctgtcgtcgtacctctccgagctgtgcgagctcgagggggtcacc
atcgagccgacggccctgccgctggtggtccgggccggtgccgggtccgcgcgcgacacc
ctctccgtgctcgaccagctgctcggcggcgccgggcctgccggtgtgacgtacgacctg
gcgagcggcctgctcggctacacccccgacaccctgctcgacggcgtggtcgacgcgttc
gccgccggcgacggcgcgtcggtgttcggcgtcgtggacaaggtgatcgagaccggccag
gacccgcggcggttcaccgaggacctgctccggaggctgcgtgacctggtgatcgtgtcc
gcggtgccggacgccccggcgaccggtctgatcgacgtctccggcgaccaggcggagcgg
ttggtgacgcaggccgcccggttcggccgcgctgagctgacccgggccgccgacctggtc
gccgccggactcaccgagatgcggggcgcgaccgcgccccggctgctgctcgagctgatc
tgcgcgcgggtgctgctgcccgccgccgaccacggcaccgacggcgtgctcgcgcggctc
gaccggctcgagcgacggatggcgatcgtcgggaccccggccacgcccgaagcacccccg
cccgccgacgcaccgcagcgggccgcggccccggcgccggccgccgaagcacccgccccg
gctccgaccgtcgaggcaccggcccctgccgccgaggcaccggcacccgtcccgacagaa
ccggagccggaaccctccgcgccccccgcggcccccgcggccgctgcggccccagcgccg
ccggagccggcagcagcgccggcgtccccgtccacgccgggcaccatgtcgctcggggac
gtccgcggcctgtggccgacggtcatcgacgcctgccgttccttgcgcaaggcgacgtgg
tcgctgatcggccagaacgcacaggtcgtcgacttcgacggcacggtcctgacgctggga
ttcccgagcagcggccttcgcgaccagttcctggggggtggccacgagcctgtcctcctc
gaggcgatgacgaaggcgatcgggctccagccccggatcgacgcgatcgtccaccagggc
gcgtcggcggcgagcccggccccgacggctgcaccggccccggtaccggagcccgacccg
ccggccgagccggcgccgcccccgccgcgtcggccgcggatggccgacatccaggccgag
cccgccgacctccacgaccccgactccgcggtcgaccgcgacgacgccgatgtcgatgcc
gagtccggcgccgacctgctcgtccgcgagctcggcgcgcaggtgatcgaggagaccccg
caccagtga
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