Nocardioides bizhenqiangii: SHK19_03150
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Entry
SHK19_03150 CDS
T10239
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
nbi Nocardioides bizhenqiangii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC2
Sigma70_r2
Sigma70_r4_2
Trypan_PARP
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
WQQ27230
UniProt:
A0ABZ0ZSI2
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Position
642816..644981
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AA seq
721 aa
AA seq
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MADLPPSSGHDAHTALLERARAGDRDAFGELYAREVDAARRLARILVGEQGADELVSESF
ARVLTQLQAGRGPTDDFRAYLHVTIRNGFRDGLRAPKESPSSDQPWLLDDVLPPVEELVD
DLDREVAVTALATLPLSWQRVLWHLEVEGRKPAEVANILDMDAGAVSSLAYRAREGLKRA
YLDQHFRAATGGQCGWTQSRLSQYVRGDLSPRAQQKVADHLDDCDACRAALATLDRVNRK
LAAWLFPVVLWGAASADKGALAWLVAAGGAGAAGGTATTGTATSGPAGWVSGATSNPMVL
GAAAVVVAAAVVGGAFALAGDDDEGGPSDSIGAEPSATDAAAPPSSEPPTQQPPGSRSPA
NRPPTEAVAPAGVPTDIPSSPTPPVDPRQPIEPTGPIEPTEPTEPTEPTEPTDPTGPPTE
PPVIVVPESPIAIEISLCGVLGSLVIPDTVGVHYELVLGDGLEGRWVVEATALNGYVLAA
GSVKVFTGNLGDFLPCLRILGTEATPTAAPDADPWTLTATTDIVDRTSHHVAATWNFSDD
MIVQAATAGWACDAPGGLYFVYTCTFDYTTDPPPPLSLTVVDDQPVPRDSPIGTVSLLVD
GSVVDSSLFDGGAVAAVRQSRRGPGDGTERTVTEPPPAATPTPQPEPEQGPAPSPVPEPE
PEPAPQPEPAPEPAPEPAPEPEPAPEPEPAPEPEPEESPAPPPPSTPEESMPPDQQVEPD
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggctgatctccctcccagcagcgggcacgacgcgcacaccgcgctgctcgagcgcgcc
cgcgcgggggaccgggacgccttcggtgagctctacgcccgcgaggtcgacgccgcccgg
cggctggcccggatcctcgtgggggagcagggtgccgacgagctggtctccgagtcgttc
gcgcgggtgctcacccagctgcaggccggccgcgggcccaccgacgacttccgtgcctac
ctccacgtcaccatccgcaacggcttccgtgacggcctccgcgctccgaaggagtcgccg
tcctccgaccagccgtggcttctcgacgacgtgctgccgccggtcgaggagctggtcgat
gacctcgaccgcgaggtcgcggtcaccgcgctggcgacgctgcccctgtcgtggcagcgg
gtcttgtggcacctcgaggtcgagggccgcaagcctgccgaggtcgccaacatcctcgac
atggacgccggcgcggtctcgtcgctggcctaccgcgctcgcgagggcctgaagcgcgcc
tacctcgaccagcacttccgggcggcgacgggcgggcagtgcggctggacgcagagtcgg
ctgtcgcagtacgtccgcggcgacctcagcccccgggcccagcagaaggtcgccgaccac
ctcgacgactgcgacgcatgccgcgcggccttggccacgctcgaccgggtcaaccggaag
ctcgcggcctggctgttccccgtcgtcctctggggtgccgcgagcgcggacaagggcgcg
ctggcgtggcttgtcgctgcgggcggtgcgggcgcggccgggggaacggcgaccaccggt
acggcgaccagcggacccgccggatgggtcagcggcgcgacgtccaatccgatggtcctc
ggcgcggccgccgtcgtagtcgcggcggccgtcgtcggtggagccttcgccctcgcgggg
gacgatgacgagggcggaccgagcgacagcatcggtgccgagccttctgccaccgatgct
gcggcgccgccgtcgagcgagcccccgacccagcaaccgccaggcagtcgatcaccggcc
aaccgtccgccgaccgaggcggtggcgccggccggggtgccgacggatatcccctcctcg
ccgacgccccccgtcgacccgcgccagcccatcgagcccaccggcccgatcgagccgacg
gagccgaccgagccgaccgagcccaccgagccgaccgatcccaccgggcctccgaccgag
ccgcccgtcatcgtcgtgccggagtcaccgatcgcgatcgagatctcgctgtgcggtgtg
ctcggttcgctggtcatccccgataccgttggcgtgcactacgagctcgtgctcggtgac
ggcctcgaggggcgctgggtggtcgaggcgacggcgctgaacggctacgtcctggccgcg
ggctcggtcaaggtgttcacgggcaacctcggcgacttcctgccgtgcctgcgcattctc
gggaccgaggccaccccgaccgctgctcccgacgcggacccgtggaccctcaccgcgacg
acggacatcgtggaccgcacgtcacatcacgtcgctgcgacctggaacttctccgacgac
atgatcgtgcaagccgcgactgcgggatgggcctgcgatgcgcccggaggtctctacttc
gtctacacctgcacgttcgactacacgactgatccgccgccgccgttgagcttgacggtg
gtcgacgaccagcccgtgccgagggactctcccatcggcacggtctcgcttttggtggac
ggctccgtcgtcgactcctccctgttcgacggcggcgccgtggccgccgtgcggcagagc
cggcgcggccccggcgacggcacggagcggacggtgaccgaaccgccgccggccgcaacc
ccgactccgcaaccggagccagagcaggggccggcgccttcgccggtccccgagccggag
cccgagcccgcgccgcagcccgagccggcacccgagccggcacccgagcccgcaccggag
ccggagcccgcacccgagccggagcccgcacccgagcccgagcctgaggagtcaccggca
ccaccgccgccatcgaccccggaggagtcgatgccgccggaccagcaggtcgagccggac
gtctag
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