Nocardioides bizhenqiangii: SHK19_03190
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Entry
SHK19_03190 CDS
T10239
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi00300
Lysine biosynthesis
nbi00470
D-Amino acid metabolism
nbi01100
Metabolic pathways
nbi01110
Biosynthesis of secondary metabolites
nbi01120
Microbial metabolism in diverse environments
nbi01230
Biosynthesis of amino acids
Module
nbi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SHK19_03190 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SHK19_03190 (dapF)
Enzymes [BR:
nbi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SHK19_03190 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WQQ27238
UniProt:
A0ABZ0ZSC6
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All DBs
Position
651149..651994
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AA seq
281 aa
AA seq
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MDSYPFLKGHGTENDFVLLPDHDGTVHGELGAERVRALCDRRAGIGGDGVLRVIRTEQID
AGRGQPAEWFMDYRNADGSLSEMCGNGIRLFGRHLALDGLVDPAQPVPIGTRDGIKTLTF
AGGRADGEITVDMGTPKVLEETEVSVVVAGVERRWPALHVDMGNPHAVAWVDDLSDVGPL
HDAPVHDDAVYPDGVNVEFVVRRGPAHVAMRVHERGSGETRSCGTGACAVMVAAAFADDA
ARDTDYRIDLPGGSLRVSWTADDRVLMTGPAVLVARGSTDL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggacagctatcccttcctcaaggggcacggcaccgagaacgacttcgtgctgctgccc
gaccacgacggcaccgtgcacggcgagctcggcgcggagcgggtgcgcgcgctgtgcgac
cggcgggccggcatcggcggtgacggcgtgctgcgcgtgatccgcaccgagcagatcgac
gcgggccggggccagcccgccgagtggttcatggactaccgcaacgccgacgggtcgctg
tcggagatgtgcggcaacggcatccggctcttcgggcgccacctcgccctggacggtctg
gtcgacccggcccagccggtgccgatcggcacccgcgacggcatcaagacgctcaccttc
gccggcggccgcgccgacggcgagatcaccgtcgacatgggtacgccgaaggtgctcgag
gaaaccgaggtctccgtcgtcgtggccggcgtggagcgccgctggccggcgctgcacgtc
gacatgggcaacccgcacgccgttgcctgggtcgacgacctctccgacgtcgggccgctc
cacgacgcacccgtccacgacgatgcggtctatcccgacggcgtcaacgtggagttcgtc
gtacggcgcgggccggcccacgtcgcgatgcgcgtccacgagcgcggctccggcgagacc
cgttcctgcggcaccggagcgtgcgcggtgatggtcgcggcggccttcgccgacgacgcg
gcacgcgacaccgactaccgcatcgacctccccggcggctccctgcgggtcagctggacc
gccgacgaccgggtcctgatgaccggccccgccgtcctcgtcgcccgcggcagcaccgac
ctgtag
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