Nocardioides bizhenqiangii: SHK19_03675
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Entry
SHK19_03675 CDS
T10239
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHK19_03675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbi03400
]
SHK19_03675
Enzymes [BR:
nbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
SHK19_03675
DNA repair and recombination proteins [BR:
nbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHK19_03675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WQQ27332
LinkDB
All DBs
Position
complement(755815..756405)
Genome browser
AA seq
196 aa
AA seq
DB search
MRRTFSRAELESFRDAVVPDLLPTAPEHDLKLLFVGINPGLWTAATQTHFAHPGNRFYPA
LLRGGVITEPIDAAAGMTDAERDVLRERGIGITNLARRATAKASELSPAELKEGGAALTA
LVERLRPRVVAVAGITAYRTAFGLPKAVLGRQPTPLAGAELWVVPNPSGLNAHETVESLA
RAYVEVARAAGLSVVE
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcgtaccttctcccgcgccgagctcgagtccttccgcgatgccgtcgtccccgac
ctgctgccgacggccccggagcacgacctcaagctgctcttcgtgggcatcaacccgggt
ctgtggacggcggcgacgcagacccacttcgcgcacccgggcaaccggttctatccggcg
ctgctgcgcggcggcgtgatcaccgagccgatcgacgccgcagccgggatgaccgacgcc
gagcgcgacgtgctccgcgagcggggcatcggcatcaccaacctggcgcggcgggccacc
gccaaggcctccgagctcagccctgccgagctgaaggagggcggggccgcgctcacggcg
ctggtcgagcggctccggccgcgggtggtcgcggtcgccgggatcaccgcctaccggacc
gccttcggcctcccgaaggccgtcctcggccgccagcccaccccgctcgccggcgccgag
ctgtgggtcgtgcccaacccgagcggcctcaacgcccacgagacggtggagagcctggcc
agggcgtacgtcgaggtcgcccgtgccgccgggctttcggtggtcgagtag
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