Nocardioides bizhenqiangii: SHK19_04780
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Entry
SHK19_04780 CDS
T10239
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SHK19_04780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nbi02000
]
SHK19_04780
Transporters [BR:
nbi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SHK19_04780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF1641
Motif
Other DBs
NCBI-ProteinID:
WQQ27548
LinkDB
All DBs
Position
complement(955037..956557)
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AA seq
506 aa
AA seq
DB search
MTVVMVVGLASGCGATRADDRGGDTLRVVGPFEIHSLEPTATSGFFTRLEVAETLVTADL
EGNLAPGLASDWSPSQGGRTWTFELVPDVTFHDGTPLTPEAAVDSLETVRRDEASPLAAA
PIEQIAATDTGLRFELSEPNLTLPAVLTHYSTMILAPAAYDDDDHVSELIGTGPYRIDRI
ELPASIEVTRFDDWRGTPPEIEKVSFQSVSRAESRALMATSDDADVVWHLEPAGRQKVEA
SDGVSMASTLQPRTIMLKVNNDHPILGDPDVRRALSMALDREAMAEAVLREPELAATQLM
PPSLTTWSQPDLAPLEHDADGARQLLESAGWEADDDGVLTKDGEALRLNLLTYPDRPELP
ALATAIQASAKEVGIEIDVEVTNSSEIPVRHADDTLELALVARHFALVSDPLVTVAETFA
PAGSEWGVQNWSDPQLTAAVDQLLTGPSEDRAEELRATIVTIAQEQLPLVPVAWYRMNAA
VQDRVEGFVFDPLETSWHFSQVRWAS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtcgtcatggtggtcggactcgcgtccggctgtggcgccacccgggcggacgat
cgaggcggcgacacgctgcgcgtcgtcggcccgttcgagatccacagcctggagccgacc
gcgacgagcgggttcttcactcggctcgaggtggccgagaccctggtgaccgcggacctc
gagggcaacctggccccgggcctggccagcgactggtccccgtcgcagggcggtaggacg
tggaccttcgagctcgtccccgacgtgacgttccacgacgggactccgctcacgccggag
gcagccgtggactcgctcgagaccgtccggcgcgacgaggccagtccactggccgcagcg
ccgatcgagcagatcgccgccacggacaccggcctgcggttcgagctgagcgaacccaac
ctcaccctgcccgcggtcctcacgcactacagcacgatgatcctggctccggcggcgtac
gacgacgacgatcacgtctccgagctgatcgggaccggtccctaccgaatcgaccggatc
gagctgcccgcctccatcgaggtcacccggttcgacgactggcgagggacgcctccggag
atcgagaaggtcagcttccagtcggtcagccgcgcggagtcacgggcgctgatggcgacg
agcgacgacgccgacgtcgtctggcacctcgagccggccgggcgccagaaggtcgaggcg
tccgacggggtctcgatggcgtcgaccctgcagccgcggacgatcatgctcaaggtcaac
aacgaccacccgatcctgggcgacccggacgtccgccgggcgctgagcatggcgctggac
cgcgaggcgatggcggaggctgtgctccgcgagcccgagctggccgccacccagctcatg
ccgccgtcgctgaccacctggagccagcccgacctcgccccgctcgagcacgacgcggac
ggggcgcgccagctgctcgagtccgcaggctgggaggccgacgacgacggcgtcctgacc
aaggacggcgaggccctccgcctgaacctgctgacctatccggaccgccccgagctgccc
gcacttgccaccgccatccaggcgtcggcgaaggaggtcggcatcgagatcgacgtcgag
gtcaccaactccagcgagatcccggtccggcacgccgacgacaccctcgagctggcgctc
gtcgcgcggcacttcgcgctggtgtccgacccgttggtcaccgtcgccgagaccttcgcg
ccggcaggctccgagtggggcgtccagaactggtcggacccgcagctcaccgccgcggtc
gaccagctcctcaccggcccctcggaggaccgggcagaggagctgcgtgccaccatcgtg
acgatcgcccaggagcagctcccgctggtgcccgtcgcctggtaccggatgaacgccgcg
gtgcaggaccgggtcgagggcttcgtgttcgaccccctcgagacctcgtggcacttctcc
caggtccggtgggcctcatga
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