Nocardioides bizhenqiangii: SHK19_05820
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Entry
SHK19_05820 CDS
T10239
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SHK19_05820 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nbi03019
]
SHK19_05820 (orn)
03009 Ribosome biogenesis [BR:
nbi03009
]
SHK19_05820 (orn)
Messenger RNA biogenesis [BR:
nbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SHK19_05820 (orn)
Ribosome biogenesis [BR:
nbi03009
]
Eukaryotic type
Pre-60S particles
RNases
SHK19_05820 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WQQ27749
UniProt:
A0ABZ0ZV96
LinkDB
All DBs
Position
complement(1163724..1164383)
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AA seq
219 aa
AA seq
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MNERLVWIDCEMTGLDLRADALIEVAALVTDFDLNVLGDGIDIVVKPPAEALDQMIDFVR
TMHETSGLLDELAGGVTLAEAEEQVMAYLAEHCPAESRPPLAGNSVATDRAFVARDMPVL
DGFLHYRIVDVSSIKELARRWYPRAYFGAPPKRGNHRALADIQESIEELRYYRDTVFVPL
PGPDSDAATVAAQRHGGSITGLGADRPGPQPDADSAGTA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgagcgactggtctggatcgactgcgagatgactgggctcgacctccgcgccgac
gcgctgatcgaggtcgcggccctggtcaccgacttcgacctcaacgtgctcggcgacggc
atcgacatcgtcgtcaagccgcctgccgaggccctcgaccagatgatcgacttcgtgcgc
accatgcacgagacctcgggcctcctcgacgagctggcgggcggggtcaccctggccgag
gccgaggagcaggtgatggcctacctcgcggagcactgtcccgcggagagccggccaccg
ctcgccggcaactcggtggcgaccgaccgtgccttcgtcgcccgcgacatgccggtgctc
gacgggttcctgcactaccggatcgtcgacgtcagctcgatcaaggagctcgcccggcgg
tggtacccccgggcctacttcggcgccccgccgaagcgcggcaaccaccgcgccctcgcc
gacatccaggagagcatcgaggagctccgttactaccgcgacacagtcttcgtgccgctg
cccggtcccgacagcgatgccgccacggtcgccgcgcagcggcatggcgggtcgatcacc
gggctcggtgccgatcgccccggcccgcagccggatgccgattctgccgggacggcctga
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