Nocardioides bizhenqiangii: SHK19_07370
Help
Entry
SHK19_07370 CDS
T10239
Name
(GenBank) Ada metal-binding domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHK19_07370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nbi03000
]
SHK19_07370
03400 DNA repair and recombination proteins [BR:
nbi03400
]
SHK19_07370
Enzymes [BR:
nbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SHK19_07370
Transcription factors [BR:
nbi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SHK19_07370
DNA repair and recombination proteins [BR:
nbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHK19_07370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
DUF7437
Motif
Other DBs
NCBI-ProteinID:
WQQ28043
UniProt:
A0ABZ0ZXR3
LinkDB
All DBs
Position
1507539..1509011
Genome browser
AA seq
490 aa
AA seq
DB search
MTTTTAGIPGLDTESCYAAVKSRDRRFDGVFYIAVRTTGIYCRPSCPARTPALHNVTFHR
SAAAAQAAGYRACKRCLPDATPGSPDWDAAATVAGRAMRLIADGVVDREGVDGLAQRLGY
TSRHLSRVLTAELGAGPLALARAQRAQTARVLVETTDLSFADIAFASGFASIRQFNDTVR
EVYAATPTQLRGRRGGARTPGAIELRLAVRTPFAGSDLLRYLAVRAVEGVEVAGDGWYAR
TLDLPHGPGTVRIELGDVLDPGQTALVPARFVLHDLRDTSAAVARVRRLLDGDCDPIAVA
DHFTGDPLIGPLVRRRPGLRVPGHVSGDEIAVRAVLGQQVSVAGARTVAGRLVAAHGRPF
TTDIPGLTHLFPDAATVAALDPEQLPMPRARGRALTGLAAALAGGDVALDRGPDRGAVRR
ALLALPGIGPWTADYIALRALGHPDIHLPTDVGVRNALTALGAPGADPSTWAPWRSYALL
HLWTSLEENS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaccactgccgggatcccgggcctcgacaccgagtcctgctacgccgcggtg
aagtcgcgcgaccgccgcttcgacggcgtgttctacatcgcggtgcggaccaccggcatc
tactgccggccgtcctgcccagcccgcacgccggcgttgcacaacgtgacgttccaccgc
agcgcggcggcggcacaggcggccggataccgcgcgtgcaagcggtgcctgccggatgcg
acgccgggtagtcccgactgggacgccgcggcgacggtcgccggacgcgcgatgcggctc
atcgccgacggtgtcgtcgaccgggagggcgtcgacggactggcgcagcgcctcggctac
acgtcgcgacacctgtcgcgggtgctcaccgcggagctcggcgccgggccgctcgcgctg
gcccgggcgcagcgggcgcagaccgcccgggtgctggtggagacgaccgacctctcgttc
gcggacatcgcgttcgcctccgggttcgcgagcatccgccagttcaacgacaccgtgcgc
gaggtctacgccgcgacgccgacccagctgcgcggccgccggggaggtgcgcggacgccc
ggggcgatcgagctccggctcgccgtccgcactccgttcgccggctccgacctcctccgc
tacctggcggtccgtgccgtcgagggcgtcgaggtggcgggcgacggctggtacgcccgc
acgctcgacctcccccacggtccgggcacggtccggatcgagctcggcgacgtgctcgac
cccggccagacggcgctggttccggcccggttcgtgctccacgacctgcgcgacaccagt
gccgcggtcgcgcgcgtccggcggctgctcgacggagactgcgacccgatcgcggtggcc
gaccacttcaccggggacccgctgatcggcccgctcgtacgacgccgcccgggcctgcgc
gtgcccggccacgtgtccggcgacgagatcgccgtccgcgccgtgctcgggcagcaggtg
agcgtcgccggagcccgcaccgtggccgggcggctcgtcgctgcccacgggcggccgttc
accaccgacatccccgggctgacccacctgttccccgacgccgccacggtcgccgcgctc
gacccggagcagctgccgatgccgcgagcgcgcgggcgcgcgctgaccggcctcgccgcg
gcgttggccggcggcgacgtcgcgctcgaccgcggccccgaccgcggcgccgtacgacgg
gcgctgctcgcactgcccggcatcgggccctggaccgccgactacatcgcgctgcgtgcc
ctcggccaccccgacatccacctgccgaccgacgtcggcgtgcgcaacgcgctcacagcg
ctgggcgcccctggcgccgatccgtcgacctgggcgccgtggcgctcttatgccctgcta
cacctgtggacctcactggaggagaactcatga
DBGET
integrated database retrieval system
