Nocardioides bizhenqiangii: SHK19_07430
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Entry
SHK19_07430 CDS
T10239
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nbi Nocardioides bizhenqiangii
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbi03032
]
SHK19_07430
03036 Chromosome and associated proteins [BR:
nbi03036
]
SHK19_07430
03400 DNA repair and recombination proteins [BR:
nbi03400
]
SHK19_07430
DNA replication proteins [BR:
nbi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SHK19_07430
Chromosome and associated proteins [BR:
nbi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SHK19_07430
DNA repair and recombination proteins [BR:
nbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SHK19_07430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Extensin_1
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
WQQ28055
LinkDB
All DBs
Position
1520553..1521218
Genome browser
AA seq
221 aa
AA seq
DB search
MNKSQFIDALAERYDGNRKAASHALDSVLDTITRQVAKGEKVAITGFGSFEKAVRNARWV
RNPQTGDRIKTKKKAVPKFTAGADLKNVISGAKKLPAVKKATPPAQKAAAPARAAAKKAT
ATVKAAAKKAAPAKKSTAKKSTAKKAAPAKKSTAKKAPAKKSTAKKAPAKKAPAKKSTAK
KAPAKKAPAKKSTAKKAPAKKAPAKKSTAKKSTAKKATSKK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcacagttcatcgatgcactcgcggagcgctacgacgggaaccgcaaggct
gcctcgcacgcactcgactccgtgctcgacacgatcacccgccaggtcgccaagggtgag
aaggtcgccatcaccggcttcgggtcgttcgagaaagcagtgcgcaacgcacgttgggtg
cgcaacccgcagaccggggaccggatcaagaccaagaagaaggcggtgccgaagttcacc
gccggcgccgacctcaagaacgtcatctccggcgcgaagaagctcccggccgtgaagaag
gcgacgcctcctgcgcagaaggcggcggcaccggcgagggctgcggcgaagaaggcaacg
gccacggtgaaggcggccgcgaagaaggctgctcccgccaagaagtcgacggcgaagaag
tcgacggcgaagaaggctgctcccgccaagaagtcgacggccaagaaggcacccgccaag
aagtcgacggccaagaaggcgcctgcgaagaaggcacccgccaagaagtcgacggccaag
aaggcacctgcgaagaaggcacccgccaagaagtcgacggccaagaaggcacctgcgaag
aaggcacccgccaagaagtcgaccgccaagaagtcgacggcgaagaaggcaacgtctaag
aagtag
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integrated database retrieval system
