Nocardioides bizhenqiangii: SHK19_07555
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Entry
SHK19_07555 CDS
T10239
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
nbi Nocardioides bizhenqiangii
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nbi03036
]
SHK19_07555 (smc)
Chromosome and associated proteins [BR:
nbi03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
SHK19_07555 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
WQQ28078
UniProt:
A0ABZ0ZUT1
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All DBs
Position
1545390..1549073
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AA seq
1227 aa
AA seq
DB search
MYLKSLTLKGFKSFASATTLQLEPGITCIVGPNGSGKSNVVDALAWVMGEQGVKSLRGGK
MEDVIFAGTAGRPPLGRAEVMLTIDNSDGALPIDYSEVTISRTMFRSGGSDYAINGTPCR
LLDVQELLSDSGIGREMHVIVGQGQLDTILHATPEDRRGFIEEAAGVLKHRKRKEKALRK
LDSTDGNLTRLNDLLSEIRRQLKPLGRQAEVARRAATVQADVRDAKARILADDLVAAQTA
LEQELADESVLVARREKVEQALAACQEREAALEAALRENLPALSAAQETLSSLGALRERL
RGTQSLAAERVRNAAGVHDADAEQAGSAKDPAELEAEADRLAEQEAEILARVAEQQAALE
AAVAARKAAEEAAAHEERRVAGLLRAAADRREGLARLHGQVNALRTRATAAEEEKGRLET
ARADAVARAERAHHDFTALETKVAGLDAGEEGLDAEHEAAVAALADVDDRLAKTREEAQQ
ADRDRSALGARKEALELGLARKDGAGALLAASDSLSGLLGSVAALVNVRTGYEAAVASAL
GAAADAVAVTDADAAVEAISHLKTDDLGRAGLLLGGGATDRSGWPDLPGGASYAADAVDC
PAEVRPALTRLLHKTVVVDDLAAARTLVADYPDVVAVTRDGDLLGAHFAAGGSNAQQSLI
EIQAAVDEATSALAEAVAASERLGFDLVRLEGERDEAKRRADVALAKLHESDATLAAVAE
ELGQYGSLARSARAEAERLADAIAQAETARAHAAAGIAELEERLASAEETGEDEPDTAEQ
ERLAQATRAARQTEMEARLALRTSEERGRALHGRVDQIRRAAEAERQARARAAERRERLL
REGRAGRAVATAVSYVLGRLEVSIDRAIRARHEVEESRRGREQELMTVRGRLRELDREHD
ELVNSVHRDEMAHAQQRMRIEQIEAKAIDELGIGAEALVAEYGPDQPVSVWGEERSASPA
SASAGLDTPSPSGSGYSTTEADTGDRVAGSASELRIEITEAEPPTVPYVRDEQVKRLRSA
ERALTMLGKVNPLALEEFTAMEERHKFLTEQLEDLKATRKDLLDIVKDVDARVEQVFTEA
YADVSAAFDQTFSRLFPGGEGRLVLTDPSNMLTTGIEVEARPPGKKIKRLSLLSGGERSL
VAVAFLVALFKARPSPFYILDEVEAALDDVNLGRLLDIYEELRENSQLIVITHQKRTMEV
GDALYGVTMRGDGVSTVISQRLRQESA
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctgaagagcctgaccctcaaggggttcaagtccttcgcatcggcgaccacgctt
cagctcgagcccggcatcacctgcatcgtcggtcccaacggctccggcaagtccaacgtc
gtcgacgccctcgcctgggtcatgggcgagcagggggtcaagagcctccgcggcggcaag
atggaggacgtcatcttcgccggtacggcgggccgcccgcccctcggccgcgccgaggtg
atgctgaccatcgacaactccgacggtgcgctgccgatcgactactccgaggtcaccatc
agccggaccatgttccggtcgggtggctccgactacgcgatcaacggcacgccctgccgg
ctgctcgacgtccaggagctgctgagcgactccggcatcggccgtgagatgcacgtcatc
gtggggcagggccagctcgacacgatcctgcacgcgactcccgaggaccggcgcgggttc
atcgaggaggccgccggcgtcctcaagcaccgcaagcgcaaggagaaggcgctccgcaag
ctcgactccaccgacggcaacctgacccggctcaacgacctgctcagcgagatccggcgc
cagctcaagccgctcggccgccaggccgaggtcgcccgccgcgccgccaccgtgcaggcc
gacgtacgcgacgccaaggccaggatcctcgccgacgacctggtcgcggcacagaccgcc
ctcgagcaggagctggccgacgagagtgtcctcgtcgcccgccgcgaaaaggtcgagcag
gcgctggccgcgtgccaggagcgcgaggccgcgctcgaggcggcgctgcgggagaacctc
cccgccctgtccgctgcccaggagacgctgtcgtccctgggggccctgcgggagcggctc
cgcggcacgcagagcctggcggccgaacgggtccgcaacgcagccggcgtccacgacgcc
gacgcggagcaggcagggagcgccaaggacccggcggagctcgaggccgaggccgaccgg
ctggccgagcaggaggccgagatcctggcccgggtcgccgagcagcaggctgcgctcgag
gcggccgtggccgcccgcaaggccgccgaggaggccgccgcccacgaggagcgccgagtc
gccggactgctgcgcgccgcggccgaccgacgcgagggtctcgcgcggctccacggccag
gtcaacgcgctgcgcacgcgggcgaccgcggccgaggaggagaagggccggctcgagacc
gcccgggcggatgcggtcgcccgcgccgagcgcgcccaccacgacttcaccgccctcgag
accaaggtcgccggtctcgatgccggcgaggagggtctcgacgccgagcacgaggccgcc
gtcgccgccctcgcggacgtcgacgaccggctcgccaagacccgcgaggaggctcagcag
gccgatcgtgaccgctcggcgctcggtgcccgcaaggaggccctcgagctgggtctggcc
cgcaaggacggcgccggcgcgctcctcgcggcctccgactcgctctccggcctgctcgga
tccgtcgcggcgctggtcaatgtgcgcaccggctacgaggcggccgtggccagcgcgctc
ggcgccgctgccgacgcggtcgccgtcaccgacgcggacgccgccgtcgaggcgatcagc
cacctcaagaccgacgacctcggtcgcgccggcctcctgctcggagggggagcgaccgat
cgcagcgggtggcccgacctgcccggcggcgcgtcgtacgccgccgacgcggtcgactgc
ccggccgaggtgcgccccgcgctcacccgcctgctccacaagaccgtcgtggtcgacgac
ctcgcggccgcccggaccctggtggccgactatcccgacgtggtcgcggtgacccgcgac
ggcgacctgctcggcgcccacttcgcggccggcggctccaacgcccagcagagcctgatc
gagatccaggccgcggtcgacgaggcgaccagcgcactggccgaggccgtcgccgcgagc
gaacggctcgggttcgacctggtccggctcgagggggagcgcgacgaggccaagcggcgc
gccgatgtcgcgctggccaagctgcacgagtccgatgcgaccctggcggccgtcgccgag
gagctgggccagtacggctcgctcgcccgctcggcgcgggccgaggcggagcggctggcc
gacgccatcgcgcaggcggagaccgcgcgggcccacgctgcggcgggcatcgccgagctc
gaggagcgactggcatccgcggaggagaccggcgaggacgagccggacaccgcggagcag
gagcggctggcgcaggccaccagagccgcccggcagacggagatggaggcgcggctcgcg
ctgcgcacctccgaggagcgcgggcgtgcgctgcacgggcgggtcgaccagatccgcagg
gcagccgaggcggagcgccaggcgcgggcgcgcgccgcggagcggcgcgagcggctgctg
cgggagggccgcgccggccgggcggtcgcgaccgccgtctcctacgtgctcggccggctc
gaggtgtccatcgaccgggcgatccgggcgcggcacgaagtcgaggagtcgcggcgcggg
cgcgagcaggagctgatgacggtccgcggccggcttcgtgagctcgaccgcgagcacgac
gagctggtcaactcggtccaccgcgacgagatggcccacgcccagcagcggatgcggatc
gagcagatcgaggccaaggcgatcgacgagctgggcatcggggccgaggccctcgtcgcc
gagtacggccccgaccagccggtgtcggtgtggggtgaggagaggtcggcgtcgccggcg
tccgcctcagcgggtctcgatacgccctcgcctagcggctcgggctactcgaccaccgaa
gcggataccggtgatcgagtagcggggagcgctagcgagctgcgtatcgagatcacggaa
gccgagccgccgacggtgccctacgtgcgcgacgagcaggtgaagcggctccggtcggcc
gagcgggcgctcacgatgctgggcaaggtcaacccgctcgcgctcgaggagttcacggcg
atggaggagcggcacaagttcctcaccgaacagctcgaggacctcaaggcgacccgcaag
gacctgctcgacatcgtcaaggacgtcgacgcccgcgtcgagcaggtcttcaccgaggcc
tacgcagacgtcagcgcggcgttcgaccagaccttctcccgcctgttccccggcggcgag
ggccgcctggtgctcaccgacccgtcgaacatgctcaccacgggcatcgaggtcgaggcc
cggccgccgggcaagaagatcaagcggctctcgctgctgtccggcggtgagcgatctctg
gtcgcggtagcgttcctggtcgcgctgttcaaggcgcgcccgtctccgttctacatcctc
gacgaggtcgaggccgcgctcgacgacgtcaatctcggacggctgctcgacatctacgag
gagctgcgggagaactcccagctgatcgtgatcacccaccagaagcgcacgatggaggtc
ggcgacgcgctctacggcgtcaccatgcgcggcgacggcgtctcgaccgtgatcagccag
cggctgcgccaggaaagcgcgtag
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