Nocardioides bizhenqiangii: SHK19_08100
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Entry
SHK19_08100 CDS
T10239
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi03030
DNA replication
nbi03430
Mismatch repair
nbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHK19_08100 (holA)
03430 Mismatch repair
SHK19_08100 (holA)
03440 Homologous recombination
SHK19_08100 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbi03032
]
SHK19_08100 (holA)
03400 DNA repair and recombination proteins [BR:
nbi03400
]
SHK19_08100 (holA)
Enzymes [BR:
nbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHK19_08100 (holA)
DNA replication proteins [BR:
nbi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SHK19_08100 (holA)
DNA repair and recombination proteins [BR:
nbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SHK19_08100 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
WQQ28182
UniProt:
A0ABZ0ZVC3
LinkDB
All DBs
Position
1663660..1664604
Genome browser
AA seq
314 aa
AA seq
DB search
MRAEDVLGRVVLVTGKEEFLAARTLEDVRAAVRAHDAESELSEAAASELSLATLGELAAP
SLFSSVRCVVVRGLEDLPDESVDGLLGYAAAPAEDVGLVLVHGGGPKGSGVLSKLRKLAT
VTEVKSGEIKPWEMGGFAVSEARRRGATLDKQAAEVLVVAVGHDLRSLAAAVDQLTSDFP
GERIDEEKVGRYFGGRAEVKNYEIADAMLAGNRALALQELRWSIESGTSEVYILSAVAAQ
LRSLANHVAGNRDGGMPPWKLKTLNTQARGWTPPALARAIRAVARADADLKGASSDASYT
LERLVLTIAAFREG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcggaggacgtgctgggccgggtggtcctggtgaccggcaaggaggagttcctc
gcggcccgcaccctcgaggacgtccgagccgccgtccgggcccatgacgcggagtcggag
ctctccgaggcggcggcctccgagctcagcctggcaacgctcggcgagctggctgccccg
tcgctgttctcctcggtgcggtgcgtggtcgtccgcggcctcgaggacctgcccgacgag
tccgtcgacgggttgctcggctatgccgccgccccggccgaggacgtcggcctcgtcctg
gtgcacggcgggggtcccaaggggtccggcgtcctgtccaagctgcgcaagctggcgacc
gtcaccgaggtcaagtcgggtgagatcaagccgtgggagatgggcgggttcgcggtcagc
gaggcgcggcggcggggtgcgaccctcgacaagcaggcggccgaggtcctcgtggtcgcc
gtcgggcatgacctccggtcactggccgcggccgtcgaccagctcaccagcgacttcccc
ggcgagcggatcgacgaggagaaggtgggtcgctacttcggcggccgcgccgaggtgaag
aactacgagatcgccgacgcgatgctggccggcaaccgggccctcgcgctccaggagctt
cggtggtcgatcgagagcggcacctccgaggtctacatcctgtccgcggtcgccgcgcag
ctccgttccctggccaaccacgtggcgggcaaccgcgacggcgggatgccgccatggaag
ctgaagaccctcaacacccaggcacgcggctggacgccacccgcgctcgcgcgggcgatc
cgcgccgtcgccagggccgacgccgacctcaagggagcctccagcgacgcgtcctacacg
ctcgagcgtctggtgctgacgatcgcggcgttccgcgaaggttga
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