Nocardioides bizhenqiangii: SHK19_09120
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Entry
SHK19_09120 CDS
T10239
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nbi Nocardioides bizhenqiangii
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbi03032
]
SHK19_09120
03400 DNA repair and recombination proteins [BR:
nbi03400
]
SHK19_09120
Enzymes [BR:
nbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SHK19_09120
DNA replication proteins [BR:
nbi03032
]
Prokaryotic type
DNA Topoisomerases
SHK19_09120
DNA repair and recombination proteins [BR:
nbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SHK19_09120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
WQQ28375
LinkDB
All DBs
Position
complement(1894355..1896844)
Genome browser
AA seq
829 aa
AA seq
DB search
MARRTTKQDLPDDFEEHILDTDIRDEMESSFLEYAYSVIYSRALPDARDGLKPVQRRILY
TLNDMGIRPDRGHVKCARVVGEVMGRLHPHGDGAIYDALVRMAQPWAMRLPMVDGHGNFG
SPGGDDPPAAMRYTECRMAPPAAVMTESIDEDTVDFRPNYDSREMEPSVLPSAIPNLVVN
GTTGIAVGMATNMAPHNLVEVVQALRHLIKHPGTDVDGLMRFIPGPDLPTGGKIVGLDGI
RDAYLTGRGTFRMRATARVETVGRRKGIVVTELPYGVGTEKVVERIKVLVQGKKLQGIAD
LKDLTDRSHGLRLVIEVKNGFVPEALLEQLYRQTPMEDTFGINNVALVDGQPRTLGLKEM
LTVFLDHRYDVVRRRSEFRRNKKAERLHLVDGLLIALLDIDEVIQVIRTSDDSAAAKERL
ISVFDLSQAQADYILEMQLRRLTRFSRIELEKEQETLRREIEELEAILADEGLLKRVVSD
ELGEVAKTFGTPRRTVLLQSAGTGAVTASAAPLEVPDDPCFALLSSTGLLARTNSAEPVG
TGGARANHDVVVSAVRTTARGEIGVLTSAGRLLRLGVLDLPAIPPSANESNLQGGVPLSE
LLSLGAGERALALCTLATDGPGLALGTRQGVVKRVNPEVLGRDEWDVIRLAEGDEVVGAI
ELRTGEEELCFVTSDAQLLHYPASGVRPQGRSGGGMAGVRVTTGERVVWFGALDLPSYDD
GAVLVTASGSSTALPGTEPGAVKVTDFAEYPPKGRATGGVRCHRFLKGDDALVFAWAGPT
PARAAAASGAPVDLPPATGRRDGSGVPGSQPLAACAGPLAAVLTAAVSG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcgtaccacgaagcaggaccttccggacgacttcgaggagcacatcctcgac
accgacatccgcgacgagatggagtcgtcgttcctcgagtacgcctactccgtcatctac
tcccgcgcgctgccggacgcgcgcgacggcctcaagccggtgcagcgccggatcctctac
acgctcaacgacatgggcatccggcccgatcgcggccacgtcaagtgcgcccgggtcgtc
ggtgaggtgatgggtcggctgcacccccacggtgacggcgcgatctacgacgccctggtg
cggatggcgcagccgtgggcgatgcggctcccgatggtcgacggccacggcaacttcggc
tcccccggcggcgacgacccgccggcagccatgcggtacacggagtgtcggatggcaccg
ccggccgcggtcatgaccgagtcgatcgacgaggacaccgtcgacttccggcccaactac
gacagccgcgagatggagccgtcggtgctgccctcggcgatccccaacctggtcgtcaac
gggaccaccggcatcgcggtcggcatggccaccaacatggcgccgcacaacttggtggag
gtggtgcaggcgctgcgccacctgatcaagcacccgggcaccgacgtcgacggcctgatg
cgcttcatccccggccccgacctcccgaccggcggcaagatcgtcgggctcgacgggatc
cgcgacgcctacctgaccggccgcggcaccttccgcatgcgcgcgaccgctcgcgtcgag
accgtcggccgacgcaagggcatcgtcgtcaccgagctgccctacggcgtcggcaccgag
aaggtcgtcgagcggatcaaggtcctcgtccagggcaagaagctgcagggcatcgccgac
ctgaaggacctcaccgaccgctcacacggcctgcggctggtgatcgaggtcaagaacggc
ttcgtgcccgaggcgctgctcgagcagctctaccggcagacgccgatggaggacaccttc
ggcatcaacaacgtcgcgctcgtcgacggccagccgcgcacgctgggcctcaaggagatg
ctcacggtcttcctcgaccaccgctacgacgtcgtacgccgccgctcggagttccgccgc
aacaagaaggccgagcggctgcacctggtcgacggactgctgatcgcgctcctcgacatc
gacgaggtgatccaggtgatccgcaccagcgacgactcggcggctgcgaaggagcggctg
atctcggtcttcgacctgtcgcaggcccaggcggactacatcctcgagatgcagctgcgc
cggctcacccggttctcccggatcgagctcgagaaggagcaggagacgctccgccgggag
atcgaggagctggaagcgatcctcgccgacgagggcctcctcaagcgggtcgtcagcgac
gagctgggcgaggtcgccaagacgttcggtacgccgcgccgcaccgtgctcctccagtcg
gccggcaccggcgcggtgaccgcgtccgccgcgcccctcgaggtgcccgacgacccctgc
ttcgcgctgctctcgtccaccggcctcctcgcccgcaccaacagcgccgagccggtcgga
accggcggcgcccgcgccaaccacgacgtggtcgtctccgctgtccgcacgaccgcgcgc
ggagagatcggcgtcctcacgtcggcgggtcgcctcctccgtctcggcgtgctcgacctg
ccggccatcccgccgtcggccaacgagtccaacctccagggcggggtcccgctgtccgag
ctgctctcgctcggcgccggtgagcgcgcgctcgcgctgtgcaccctcgccaccgacggg
ccgggcctcgcgctcggcacccgccagggcgtggtcaagcgggtcaaccccgaggtgctg
gggagggacgagtgggacgtcatccgtctcgccgagggcgacgaggtcgtcggcgcgatc
gagctgcgcaccggcgaggaggagctctgcttcgtgacctccgacgcccagctgctccac
taccccgcgtccggggtccgcccgcagggccgttcgggcggcggcatggcaggcgtccgc
gtgaccaccggcgagcgggtggtctggttcggggccctcgacctcccgtcgtacgacgac
ggcgcggtgctggtcaccgcctccggctcgtccaccgcgctccccggcaccgagcccggc
gcggtcaaggtgaccgacttcgccgagtacccgcccaagggccgggccaccggcggtgtc
cgctgccaccggttcctcaagggcgacgacgccctcgtcttcgcctgggccggccccaca
ccggcccgcgcagcggccgccagcggcgcaccggtcgacctgccacccgcgaccggacga
cgtgacggctcgggcgtccccggcagccagccactggccgcgtgcgccggaccgctcgcg
gcggtgctcaccgcggctgtgtcagggtga
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