Nocardioides bizhenqiangii: SHK19_10040
Help
Entry
SHK19_10040 CDS
T10239
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi00260
Glycine, serine and threonine metabolism
nbi00460
Cyanoamino acid metabolism
nbi00630
Glyoxylate and dicarboxylate metabolism
nbi00670
One carbon pool by folate
nbi00680
Methane metabolism
nbi01100
Metabolic pathways
nbi01110
Biosynthesis of secondary metabolites
nbi01120
Microbial metabolism in diverse environments
nbi01200
Carbon metabolism
nbi01230
Biosynthesis of amino acids
nbi01240
Biosynthesis of cofactors
nbi04981
Folate transport and metabolism
Module
nbi_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SHK19_10040
09102 Energy metabolism
00680 Methane metabolism
SHK19_10040
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SHK19_10040
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SHK19_10040
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SHK19_10040
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SHK19_10040
Enzymes [BR:
nbi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SHK19_10040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Pax2_C
Motif
Other DBs
NCBI-ProteinID:
WQQ28556
LinkDB
All DBs
Position
2091362..2092831
Genome browser
AA seq
489 aa
AA seq
DB search
MSDPDSNSSSSNNNRLVSGAYNQALEVIASVEPRIADATRKELADQRGSLKLIASENYAS
PAVLLTMGTWFSDKYAEGTIGHRFYAGCQNVDTVEALAAEHARELFGAPYAYAQPHSGID
ANLVAYWSILAHRIESPWLEKAGSKNVNELSDADWERLRHEFGNQRLLGMSLDSGGHLTH
GFRPNISGKMFHQQQYGTDPETGLLDYDVVRAKAKEFKPLVLVAGYSAYPRRVNFAKMRE
IADEVGATLFVDMAHFAGLVAGKVFTGDEDPVPYAHITATTTHKSLRGPRGGLLLAQEEY
ASSVDRGCPMVLGGPLSHVMAAKAVALAEARRPEFQTYSQNVADNAKSLAEGFLSRGAKL
VTGGTDNHIVLLDVTSFGLTGRQAESALLDAGVVTNRNSVPADPNGAWYTSGIRLGTPAL
TTRGFGKDEFDRVAELIVHVLQNTQPGSAKAGGPSKATYALGDGVADKVKDASAEMLDKF
PLYPGLELV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacccggactccaacagctccagcagcaacaacaacaggttggtcagcggtgcc
tacaaccaggccctggaggtgatcgcgagcgtcgagccgcggatcgccgacgcgacccgc
aaggagctcgccgaccagcgggggtccctcaagctgatcgccagcgagaactacgcctcg
cccgcggtgctgctgacgatgggcacctggttcagcgacaagtacgccgagggcacgatc
ggccatcgcttctacgcgggctgccagaacgtggacacggtcgaggcgctggcggccgag
cacgcacgcgagctgttcggagcgccgtacgcctatgcgcagccgcactccggcatcgac
gccaacctggtcgcgtactggtcgatcctcgcccaccggatcgagagcccgtggctggag
aaggccggctccaagaacgtcaacgagctcagcgacgcggactgggagaggcttcgtcac
gagttcggcaaccagcggctgctcggcatgtcgctcgactccggtggtcacctcacgcac
ggcttccgcccgaacatctccggcaagatgttccaccagcagcagtacggcaccgacccg
gagaccgggctgctcgactacgacgtcgtgcgggcgaaggccaaggagttcaagccgctg
gtgctggtggcgggctactccgcctacccgcggcgggtgaacttcgccaagatgcgcgag
atcgccgacgaggtcggcgccaccctgttcgtcgacatggcccacttcgcaggcctggtc
gcgggcaaggtcttcaccggtgacgaggacccggtgccgtacgcccacatcaccgcgacc
acgacccacaagtcgctgcgcggtccgcgcggcggcctgctgctcgcccaggaggagtac
gcgtcgtcggtcgaccgcggctgcccgatggtgctcggcggtccgctgtcgcacgtgatg
gccgccaaggcggtggccctcgccgaggcgcgccgcccggagttccagacctactcccag
aacgtcgccgacaacgcgaagtcgctcgccgagggcttcctgagccgcggcgccaagctg
gtcaccggcggcaccgacaaccacatcgtgctgctcgacgtcacctcgttcgggctgacc
ggccgccaggccgagtcggcgctgctcgacgccggcgtcgtcaccaaccgcaactcggtg
cccgccgacccgaacggcgcctggtacacctccggcatccgcctcgggacgccggccctg
accacgcgcgggttcggcaaggacgagttcgaccgggtcgccgagctgatcgtgcacgtg
ctgcagaacacccagcccggctcggccaaggccggcggcccgtcgaaggcgacgtacgcc
ctcggcgacggcgtcgccgacaaggtcaaggacgcctcggccgagatgctcgacaagttc
ccgctctaccccggtctcgagctggtctga
DBGET
integrated database retrieval system
