Nocardioides bizhenqiangii: SHK19_10300
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Entry
SHK19_10300 CDS
T10239
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SHK19_10300 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nbi03400
]
SHK19_10300 (ruvB)
Enzymes [BR:
nbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SHK19_10300 (ruvB)
DNA repair and recombination proteins [BR:
nbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SHK19_10300 (ruvB)
RecFOR pathway proteins
SHK19_10300 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
RNA_helicase
Mg_chelatase
nSTAND3
AAA_3
MCM
NTPase_1
AAA_14
Sigma54_activ_2
Zeta_toxin
IstB_IS21
AAA_25
NACHT
DUF815
AAA_28
ABC_tran
NPHP3_N
AAA_18
NB-ARC
TsaE
AAA_33
AAA_19
AAA_17
Parvo_NS1
AAA_11
Rad17
Motif
Other DBs
NCBI-ProteinID:
WQQ28602
LinkDB
All DBs
Position
2138034..2139113
Genome browser
AA seq
359 aa
AA seq
DB search
MPFHEDELEVAEDSHLRSLTAMEAEGDDRAVEAALRPRSLDEVVGQTRVRDQLGLVLEAA
RRRGRAPDHVLLSGPPGLGKTTLAMIIAHEMNTPLRLTSGPAITHAGDLAAILSGLNEGD
VLFVDEIHRMSRPAEEMLYMAMEDFRVDVVIGKGPGATAIPLEIPPFTLVGATTRAGLLP
GPLRDRFGFTAHLEFYESADLDRIVHRSAGLLDVALTKEGSAEIASRSRGTPRIANRLLR
RVRDFAQVRADGVVTHPVARAALELYEVDELGLDRLDRAVIDALCRRFGGGPVGVSTLAV
AVGEERETVEEVAEPFLVRSGFLARTPRGRIATPAAWEHLGLTPPPMPVEQADPTLFEE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccacgaggacgagctcgaggtggccgaggactcccacctgcggtccctcacc
gcgatggaggccgagggcgacgaccgcgcggtcgaggcggcgctgcggccgcgcagcctc
gacgaggtcgtcggacagacccgggtccgcgaccagctgggcctggtgctcgaggcggcc
cgccgccggggacgggcgcccgaccacgtgctgctgtccggccctcccgggctcggcaag
accacgctcgccatgatcatcgcccacgagatgaacacgccgctgcgcctcaccagcggg
ccggcgatcacgcatgcgggtgacctcgcggccatcctgtccgggctcaacgagggcgac
gtgctcttcgtcgacgagatccaccggatgtcgcggccggcggaggagatgctctacatg
gcgatggaggacttccgggtcgacgtcgtcatcggcaagggaccgggcgcgaccgcgatc
ccgctggagatcccgcccttcaccctcgtcggtgccaccacccgggcaggactgttgccg
ggcccgctgcgcgaccgcttcggcttcaccgcgcacctggagttctacgagtcggccgac
ctcgaccggatcgtgcaccgctcggcgggcctgctcgacgtggcgctgacgaaagaagga
tcggccgagatcgcctcgcgctcccgcggcacgccccggatcgccaaccggctgctccgg
agggtccgcgacttcgcccaggtccgcgccgacggagtggtcacccatccggtggcgcgg
gctgcgctcgagctgtacgaggtcgacgagctcggtctcgaccggctcgaccgggccgtg
atcgacgcgctgtgccgacggttcggaggcgggccggtcggggtgtcgacgctggccgtc
gccgtcggcgaggagcgtgagaccgtcgaggaggtggcggagccgttcctcgtgcgcagc
gggttcctcgcccgcaccccccgcggccggatcgcgaccccggccgcgtgggagcacctc
gggctgacgcccccgccgatgcccgtcgagcaggccgaccccaccctgttcgaggagtag
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integrated database retrieval system
