Nocardioides bizhenqiangii: SHK19_11085
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Entry
SHK19_11085 CDS
T10239
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi00260
Glycine, serine and threonine metabolism
nbi00630
Glyoxylate and dicarboxylate metabolism
nbi00670
One carbon pool by folate
nbi00785
Lipoic acid metabolism
nbi01100
Metabolic pathways
nbi01110
Biosynthesis of secondary metabolites
nbi01200
Carbon metabolism
Module
nbi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SHK19_11085 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SHK19_11085 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SHK19_11085 (gcvP)
00670 One carbon pool by folate
SHK19_11085 (gcvP)
Enzymes [BR:
nbi01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
SHK19_11085 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WQQ24517
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Position
2296878..2299763
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AA seq
961 aa
AA seq
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MSDLPTLPELDGALPFVSRHLGPDQGQVATMLERLGYPSLEALMDEAVPAGIRTTGPLDL
PAALSEAAVADELRALAASNAPGEPMIGLGYHATITPPVVRRNVLEDPSWYTAYTPYQPE
ISQGRLEALLNFQTMISDLTGLPTSGSSLLDEGTAAAEALALVHRARRNLSGPFVLDADA
LPQTIDVVRTRAEAIGMEVVVADLTAGLPDGDLAGVLVQYPGASGRVLDPRPVVDEIHER
GGLAVVAADLLALTLLEAPGSFGADVVVGSSQRFGVPLFYGGPHAGFMSVSAGLERQIPG
RLVGVSLDVEGRPAYRLALQTREQHIRRDKATSNICTAQVLLAVTASMYAVYHGPDGLRQ
IATRTHRYAAVLAHALAQSGLAPAHDRFFDTLTVPVPGRAAEVVAAARSLGVHLRKVDAD
TVGLSTSERTTRSTVSTVLKAFGIEHPDIDTLDRTTSDALPPELRRTTEFLEHPVFNTHH
NETSMLRYLHRLSSRDYALDRGMIPLGSCTMKLNATTEMEPISLHGFADLHPFVPAEHAT
GYRHLVDQLESWLAEVTGYDKVSIQPNAGSQGEFAGMLAIRAFHDANGDHDRRVCLIPSS
AHGTNPASAVMAGMTVVVVKADEDGTVDLADLRAKCEQHADTLAAIMVTYPSTHGVYEET
ITELCEIVHTHGGQVYIDGANFNALLGYAKPGQFGGDVSHLNLHKTFCIPHGGGGPGVGP
VAVRAHLAPYLPSHPLHPEESKREGVGAISAAPYGSTGILPISWAYVRMMGSDGLAQATA
VAVLSANYVAARLGEHFPVLYRGDSGLVAHECILDLREITKRTGVTVDDVAKRLIDYGFH
APTMSFPVAGTLMVEPTESEDLAELDRFCEAMIAIRGEIDRVESGEWKVDDSPLRRAPHT
ARALVGEWDRVYTREEAVFPSGITGLNGSGDKYWPPVARIDQAYGDRNLVCSCPPVDAYA
E
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgaccttcccacgcttcccgagctcgacggcgcactgccgttcgtgagccgccac
ctcggccccgaccagggccaggtcgcgaccatgctcgagcggctcggttacccgtcgctc
gaggcgctgatggacgaggcggtgccggccggcatccgcacgaccggtccgctcgacctg
ccggccgccctcagtgaagccgcggtggccgacgagctccgggcgctggcggcgtccaac
gccccgggcgagccgatgatcggactcgggtaccacgcgaccatcaccccgccggtggtc
cgccgcaacgtgctcgaggacccgagctggtacaccgcctacacgccctaccagcccgag
atctcccagggccggctcgaggcgctgctcaacttccagacgatgatcagcgacctcacc
ggcctgccgacgtccggctcgtcgctgctcgacgagggcaccgcggccgccgaggcgctc
gctctcgtccaccgcgcccgccgcaacctgagcggcccgttcgtgctcgacgccgacgcg
ctgccccagaccatcgacgtggtccgcacccgggccgaggcgatcggcatggaggtcgtc
gtcgccgacctcaccgcgggccttcccgacggagacctcgccggcgtcctcgtgcagtac
cccggcgcctcgggccgcgtgctcgacccccgtccggtggtcgacgagatccacgagcgc
gggggactggcggtcgtcgccgccgacctgctggcgctgaccctcctggaggcgcccggc
tcgttcggcgccgacgtcgtcgtggggtcgagccagcggttcggcgtacccctcttctac
ggcggtccgcacgcgggtttcatgagcgtgagcgccggcctcgagcggcagatcccgggt
cggctggtcggcgtctcgctcgacgtggagggccgcccggcctaccgactggcgctgcag
acccgcgagcagcacatccggcgggacaaggcgacctccaacatctgcaccgcccaggtc
ctgctcgccgtcaccgcgtcgatgtacgccgtctaccacggacccgacggcctgcggcag
atcgcgacccgcacccaccgctacgccgcggtcctggcgcacgcgctggctcagagcggc
ctggcaccggcgcacgacaggttcttcgacacgctgacggtgccggtccccggccgggcg
gctgaggtggttgcggccgcccggagcctgggggtgcacctgcgcaaggtggacgccgac
accgtggggttgtcgacgtccgaacgcacgacgcgttctaccgtctcgaccgtcctgaag
gcgttcggtatcgagcacccggacatcgacaccctcgaccggaccacgagcgacgccctg
ccgccggagctgcgccggacgacggagttcctggagcacccggtcttcaacacccaccac
aacgagacgtcgatgctgcgctacctgcaccggctgtcgagccgcgactacgcgctcgac
cggggcatgatcccgctcggctcgtgcacgatgaagctcaacgcgaccacggagatggag
ccgatctcgctgcacggcttcgccgacctccaccccttcgtcccggccgagcacgccacc
ggctaccggcacctggtcgaccagctcgagagctggctggccgaggtcaccggctacgac
aaggtgtccatccagcccaacgcagggtcgcaaggtgagttcgcggggatgctcgcgatc
cgggcgttccacgacgccaacggggatcacgaccgccgggtctgcctgatcccgtcgtcg
gcccacggcaccaaccccgcgtccgcggtgatggccggcatgacggtcgtcgtcgtcaag
gccgacgaggacggcaccgtcgacctcgccgacctgcgcgccaagtgcgagcagcacgcg
gacaccctcgccgcaatcatggtcacctacccgtcgacgcacggcgtctacgaggagacc
atcaccgagctgtgcgagatcgtgcacacgcacggcggccaggtctacatcgacggagcc
aacttcaacgcgctgctgggctacgccaagccggggcagttcggaggcgacgtctcccac
ctcaacctgcacaagacgttctgcatcccgcacggtggcggtggccccggtgtgggtccg
gtcgcggtgcgcgcccacctggcgccgtacctcccctcgcacccgctgcaccccgaggag
tccaagcgcgagggcgtcggcgcgatcagcgcggcgccgtacggctcgacggggatcctg
ccgatctcctgggcctacgtgcggatgatgggctccgacggcctcgcgcaggcgaccgcg
gtcgcagtgctgtccgccaattacgttgctgccaggctcggcgagcacttcccggtgctc
taccgcggcgactccggcctggtcgcgcacgagtgcatcctcgacctgcgcgagatcacg
aagcggaccggggtgacggtcgacgacgtggcgaagcggctgatcgactacggcttccac
gcgccgaccatgtcgttcccggtcgcggggacgctcatggtcgagccgacggagtccgag
gacctggccgagctggaccggttctgcgaggcgatgatcgcgatcaggggtgagatcgac
cgggtcgagtccggcgagtggaaggtcgacgactccccgctgcgccgcgccccgcacacc
gcacgcgcgctggtgggggagtgggaccgggtctacacccgcgaggaggccgtcttcccg
tccggcatcactgggctgaacgggtcgggcgacaagtactggccgccggtcgcccgcatc
gaccaggcgtacggcgaccgcaacctggtgtgctcctgcccgccggtggacgcctatgcc
gagtga
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