Nocardioides bizhenqiangii: SHK19_11410
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Entry
SHK19_11410 CDS
T10239
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nbi Nocardioides bizhenqiangii
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nbi03051
]
SHK19_11410 (pafA)
Enzymes [BR:
nbi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
SHK19_11410 (pafA)
Proteasome [BR:
nbi03051
]
Prokaryotic proteasome
Bacterial regulatory particles
SHK19_11410 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WQQ24578
UniProt:
A0ABZ0ZLK7
LinkDB
All DBs
Position
complement(2357076..2358437)
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AA seq
453 aa
AA seq
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MDRRIFGIENEYGVTCTFKGQRRLSPDEVARYLFRKVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDDVVELVTHDKAGERVLEGLLLDAEQRLHDEGIAGEIYLFKNNTDSAGNSY
GCHENYLVSRAGEFSRLADVLIPFLVTRQIIVGAGKVTQTPRGTSYSVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVASCDLVLRMIEEGVVM
RDLTMENPIRAIREISHDVTGRRKIRLANGREASALDIQGEYLSKARDFVDRRGISTPLI
ERTLDLWERGLKAVESDDLGLVDREIDWVIKWKLIDRYRAKHGLPLSHPRVAQLDLAYHD
IHRNRGLYYLLEKRGAVARVSSDLRIFEAKSVPPQNTRARLRGEFIRKAQERRRDFTVDW
VHLKLNDQAQRTVLCKDPFRAYDERVQRLIDGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtggaccgccgcatcttcgggatcgagaacgagtacggcgtcacctgcacgttcaagggg
cagcgccggctgagcccggacgaggtggcgcgctacctgttccgcaaggtggtgtcctgg
gggcggtccagcaacgtcttcctccgcaacggggcccggctctacctcgacgtcggcagt
cacccggagtacgccactcccgagtgcgacgacgtggtcgagctggtcacgcacgacaag
gcgggggagcgggtcctcgagggcctgctgctcgacgccgagcagcggctgcacgacgag
ggcatcgccggcgagatctacctcttcaagaacaacaccgactccgccggcaactcctac
ggctgccacgagaactacctggtcagccgggcgggcgagttcagccggctcgccgacgtg
ctgatcccgttcctcgtcacccggcagatcatcgtcggggccggcaaggtcacccagacg
ccgaggggtacgtcgtactccgtcagccagcgggcagagcacatctgggagggcgtctcg
agcgccaccacccgcagccggccgatcatcaacacccgcgacgagccgcacgccgacgcg
gagaagtaccgccggctccacgtgatcgtcggcgacagcaacatgagcgagaccaccacg
atgctgaaggtggcgtcctgcgacctggtgctgcggatgatcgaggagggcgtcgtgatg
cgcgacctcacgatggagaacccgatccgggcgatccgggagatctcccacgacgtcacc
ggccggcgcaagatccggctggccaacggccgtgaggcgagcgcgctcgacatccagggt
gagtacctctccaaggctcgggacttcgtcgatcgacgaggcatcagcacgcccctgatc
gagcggacgctcgacctgtgggagcggggcctcaaggcggtcgagtccgacgacctcggc
ctcgtcgaccgcgagatcgactgggtgatcaagtggaagctcatcgaccgctaccgcgcg
aagcacggcctgccgctgagccacccccgcgtcgctcagctcgacctcgcctaccacgac
atccaccgcaaccgtggcctctactacctgctcgagaagcgtggtgcggtcgcccgggtc
agcagcgacctccgcatcttcgaggccaagtcggtgccgccgcagaacactcgcgcccgg
ttgcgcggcgagttcatccgcaaggcgcaggagcgccgtcgcgacttcaccgtcgactgg
gtgcacctcaagctcaacgaccaggcgcagcggacggtgctgtgcaaggacccgttccgg
gcctacgacgaacgggtccagcgcctgatcgacgggatgtag
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