Nocardioides bizhenqiangii: SHK19_14555
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Entry
SHK19_14555 CDS
T10239
Name
(GenBank) DEAD/DEAH box helicase
Organism
nbi Nocardioides bizhenqiangii
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Motif
Other DBs
NCBI-ProteinID:
WQQ25183
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Position
2993016..2996198
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AA seq
1060 aa
AA seq
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MDVLASLTDDFLEEHFAPETLERARGYLDRIDGPPHLQQLSAGSVTATAYVYGSAPTAYH
VQLHCEVGRPSGRSRARTHGWIFSLCTCPVRNMCKHGAAVALSMREGHVSADRAPEWERR
LGSLVEDLSRTADPEVEPFPLALQFTLEHRRVYSYRDEGPLLCLRPLRPGAKQAWIKGGA
DWSDIPGAVLARTLLPDQADAVGALHGALQRHRGYHVAGTAPTLAQFGPHLPRMLRAAEA
AGVELVPVPPLAAVTIREKPVGMTAEITSDDTVARMTLGVDVDGELWRGEQVRFLGNDRV
VALLHEGHLQIAELDRDAPTVARRLIEEEPLEVPATELDAFRGRLAGLLRHLTVRSPDGS
VDVPAPVRPILVLKVTWRSSAAADLDWGWRYDDQRCDLNSRDRLGGLRDRRAEATVRDSV
PASLLGRDEVRDGDALELAIHDLPHLRDLPDVEVTEVQRPDFREATSAPEISFDVVEPDD
DAGYTDWLDLEVTVNVEGERVPLPDVIAALTLEHEFLVLPSGLFITTDRPEFDRLREVVT
AAAELRERDGDRIGVGTHDLGLWAQLAETGIVDAEAAAWVARAQALRDLVEIPRPDVVGL
TTELRSYQREGFWWLAFLWEHGLGGILADDMGLGKTLQVLALVQHARRRRPDVGPFLVVA
PTSVVTAWAHEAEHHAPELRVGLCGRRTDDVAAIAADSDVVVTTYTVLRLAHARYAAVPW
GGLVLDEAQQVKNHQSKTYAAVRTIAAPFKLAVTGTPFENRLMELWALLSITVPGLYPWP
RQFNERVVRPVERAGDRVVLDRFRSRIRPFLLRRTKELVASDLPPKQEQVLDVVLEPRHR
KIYDTHLARERQRILGLVDDFDRNRVAIFSALTKLRQLALDPALVDPAHDAVGSAKLDLL
VDHLEEITAEGHRALVFSQFTSFLSRVRDRLAAEDIGATYLDGSTRDRAAVIDEFRAGGA
PVFLISLKAGGVGLTLTEADYVFVLDPWWNPAAEAQAVDRAHRIGQTAHVHVYRLVASDT
IEEKVMELKGRKAELFARVIDGQGAMAQGIDADDIRGLFE
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtactcgcctccctgaccgacgacttcctcgaggagcacttcgcccccgagacg
ctcgagcgcgcccgcgggtacctcgaccggatcgacgggccgccgcacctccagcagctg
agcgcggggtcggtcacggcgacggcgtacgtctacgggtccgcccccacggcctaccac
gtccagctgcactgcgaggtcggccggcccagcgggcgcagccgggcgcgcacccacggg
tggatcttcagcctctgcacctgtccggtccgcaacatgtgcaagcacggcgctgcggtc
gccctgagcatgcgggagggccacgtctccgccgatcgggcgccggaatgggagcggcgg
ctgggatcgctcgtcgaagacctgtcgcgcaccgccgaccccgaggtcgagccgttcccg
ctcgcactgcagttcaccctcgagcaccgccgcgtctactcctaccgcgacgaggggccg
ctgctgtgcctccgaccgctgcggccgggcgccaagcaggcgtggatcaagggcggtgcc
gactggtccgacatccccggcgcggtcctggcccggacgctgctgcccgatcaggccgac
gccgtcggcgccctgcacggagccctccagcgccaccgcggctaccacgtcgccggcacc
gcaccgaccctcgcgcagttcggaccccacctcccgaggatgctccgcgcggcggaagcc
gccggtgtcgagctggtcccggtgccgccgctggcggcggtgaccatccgggagaagccg
gtgggcatgacggccgagatcacgagcgacgacacggtggcgcggatgacgctcggcgtc
gacgtcgacggtgagctctggcgcggtgagcaggtccggttcctcggcaacgaccgggtc
gtcgccctcctccacgagggtcacctgcagatcgccgagctcgaccgcgacgcccccacg
gtcgcccgccggctcatcgaggaagagccgctcgaggtgccggcgacagagctcgacgcg
ttccggggccggctcgccgggttgctccggcacctgaccgtccgctcccccgacgggtcc
gtcgacgtgccggctccggtgcggccgatcctcgtgctcaaggtcacctggcgctcgtca
gcggcggcggacctcgactgggggtggcgctacgacgaccagcgttgcgacctcaacagc
cgggaccggctcggcgggctgcgcgaccggcgcgccgaggcgaccgtgcgcgactcggtg
ccggcctcccttctcggacgcgacgaggtccgcgacggcgacgcgctggagctcgcgatc
cacgacctcccccacctccgcgacctgcccgacgtcgaggtcaccgaggtgcagcggccg
gacttccgggaggcgacatccgcgccggagatcagcttcgacgtggtcgagccggacgac
gacgcgggctacaccgactggctggacctggaggtgacggtcaacgtcgagggtgagcgg
gtcccgttgcccgacgtgattgccgccctcaccctcgagcacgagttcctggtcctgccg
agcgggctcttcatcacgaccgaccggccggagttcgaccggctccgcgaggtggtgacg
gctgccgccgagctccgcgagcgcgatggcgaccggatcggcgtcggcacccacgacctg
ggcctgtgggcacagctcgccgagaccggcatcgtcgacgccgaggccgccgcgtgggtc
gcccgggcccaggcgctgcgcgacctggtcgagatcccgcggcccgacgtggtcgggctg
acgaccgagctccggtcctaccagcgcgaggggttctggtggctggccttcctctgggag
cacggcctcggcgggatcctggccgacgacatggggctcggcaagacgctccaggtgctg
gcgctggtccagcacgcgcgccggcggcgccccgacgtcggaccgttcctcgtggtggct
ccgacgagcgtggtgaccgcgtgggcccacgaggccgagcaccatgcgccggagctgcgg
gtcgggctctgcgggcgccgtaccgacgacgtcgcggcgatcgccgccgacagcgatgtc
gtcgtgaccacctacacggtcctccggctggcccatgcccgctacgccgcggtgccgtgg
ggtggcctggtgctcgacgaggcgcagcaggtcaagaaccaccagagcaagacctacgca
gcggtccgcacgatcgcggcgccgttcaagctcgccgtcaccggcacgccgttcgagaac
cgcctcatggagctgtgggcgctgctgtcgatcacggtgccggggctgtacccctggccg
cgccagttcaacgaacgcgtcgtccgcccggtcgagcgcgccggcgaccgcgtggtgctc
gaccggttccgcagccggatccggccgttcctcctgcgccgcaccaaggagctggtcgcc
agcgacctgccgcccaagcaggagcaggtgctcgacgtcgtgctcgagccccggcaccgc
aagatctacgacacccacctcgccagggagcgccagcggatcctcggcctggtcgacgac
ttcgaccgcaaccgggtggcgatcttcagcgcgctcaccaagctgcggcagctcgcgctc
gacccggcactggtcgacccggcgcacgacgcggtcgggtcggcgaagctcgacctgctg
gtcgaccacctcgaggagatcaccgccgaggggcaccgggccctggtgttcagccagttc
acgtcgttcctcagccgggtccgcgaccggctggctgccgaggacatcggcgcgacctac
ctcgacggctccacccgcgaccgggcggcggtgatcgacgagttccgcgccggcggggcg
ccggtcttcctcatctcgctcaaggccggaggggtcggcctcaccctgacggaggccgac
tacgtcttcgtgctcgacccctggtggaaccccgccgccgaggcgcaggcggtcgaccgg
gcgcaccggatcggccagaccgcccacgtccacgtctaccgactggtcgcgagcgacacc
atcgaggagaaggtgatggagctcaagggacgcaaggccgagctgttcgcccgggtcatc
gacggtcagggcgcgatggcgcagggcatcgacgccgacgacatccgcgggttgtttgag
tga
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