Nocardioides bizhenqiangii: SHK19_16940
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Entry
SHK19_16940 CDS
T10239
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nbi Nocardioides bizhenqiangii
Pathway
nbi00020
Citrate cycle (TCA cycle)
nbi00190
Oxidative phosphorylation
nbi00650
Butanoate metabolism
nbi00720
Other carbon fixation pathways
nbi01100
Metabolic pathways
nbi01110
Biosynthesis of secondary metabolites
nbi01120
Microbial metabolism in diverse environments
nbi01200
Carbon metabolism
Module
nbi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nbi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
nbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SHK19_16940
00650 Butanoate metabolism
SHK19_16940
09102 Energy metabolism
00190 Oxidative phosphorylation
SHK19_16940
00720 Other carbon fixation pathways
SHK19_16940
Enzymes [BR:
nbi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SHK19_16940
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
Pyr_redox
Thi4
FAD_oxidored
Pyr_redox_3
AlaDh_PNT_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
WQQ25641
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Position
complement(3487664..3489505)
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AA seq
613 aa
AA seq
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MTGNEMSGDARGGIERHQYDVIVIGAGGSGLRAAIAAHDAGARVAVVCKSLLGKAHTVMA
EGGAAAAMGNLYPEDNWQVHFRDTMRGGKMLNNWRMAQLHAQEAPERVMELEDWGALFDR
TADGLISQRDFGGHRYARLAHIGDRTGLEMIRTLQQRLVALGIDVFMECTVTDLLKAESD
DGANAIAGAFAYWRESGRFIVFEAPAVVLATGGFGKAWKVTSNSWEYTGDGHALALRAGA
TLINMEFVQFHPTGMVWPPSVKGLLVTESVRGDGGILKNSEGNRFMFDHIPEFFRKETAD
SIEEADRWYDDKKNNRRPPELLPRDEVARAINAEIKAGRGSPHGGVFLDIASRRTPEFIR
KRLPSMYHQFKELADVDITAEPMEIGPTCHYAMGGIEVDPETELSVVPGLYAVGECSGGM
HGSNRLGGNSLSDLIVFGRRAGDAAASYAAGLAERPPISDDDVAAAQASAVAPFEVEGRE
NPYTIQQDLQQAMNDLVGIIREGSELEQALQEVERLKERATQMHVEGNRQYNPGWHLAID
LRNMLLVGECVAKAALARQESRGGHTRDDFPGPDPEWGGKNLVLRLNTEGTGVDLTEQAI
PGMPAELKKFFEE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcaacgagatgtccggcgacgcccggggcggcatcgaacggcaccagtacgac
gtgatcgtgatcggcgccggcggctcggggctgcgggccgcgatcgcggcccacgacgcc
ggcgcccgggtggcggtcgtctgcaagtcactcctcggcaaggcccacacggtgatggcg
gagggtggcgccgccgcagcgatgggcaacctctaccccgaggacaactggcaggtgcac
ttccgcgacaccatgcgcggcgggaagatgctcaacaactggcggatggcccagctccac
gcccaggaggcgcccgagcgggtgatggagctcgaggactggggcgcgctcttcgaccgt
acggcggacgggctgatcagccagcgcgacttcggcggccaccgctacgcccggctcgcc
cacatcggcgaccgcaccggcctggagatgatccggaccctccagcagcggctggtcgcg
ctgggcatcgacgtcttcatggagtgcacggtcaccgacctcctcaaggcagagtccgat
gatggggcaaacgcgatcgcgggtgcgttcgcctactggcgcgagtccggccggttcatc
gtgttcgaggcgccggcggtcgtgctcgccaccggcgggttcggcaaggcgtggaaggtc
acctccaactcgtgggagtacaccggtgacggccacgccctggcgctccgcgccggggcc
acgctcatcaacatggagttcgtccagttccacccgaccggcatggtgtggcccccgtcg
gtcaagggtctgctcgtcaccgagtcggtgcgcggcgacggcggcatcctgaagaactca
gagggcaaccgtttcatgttcgaccacatccctgagttcttcaggaaggagacggccgac
tcgatcgaggaggccgaccggtggtacgacgacaagaagaacaaccgccgccctcccgag
ctcctgccccgggacgaggtggcccgggcgatcaacgccgagatcaaggcgggcagggga
tcaccgcacggaggcgtgttcctcgacatcgcgtcccgccgtaccccggagttcatccgg
aagcggctgccgtcgatgtaccaccagttcaaggagctcgcggacgtcgacatcaccgcc
gagccgatggagatcggcccgacctgccactacgcgatgggaggcatcgaggtcgatccg
gagacagagctgtcggtcgtgcccggcctctacgccgtcggcgagtgctccggcggcatg
cacgggtccaaccggctgggtggcaactcgctgtccgacctgatcgtgttcggtcgccgc
gcgggcgacgcggcggcgtcgtacgccgcgggactggccgagcggccgccgatctcggac
gacgacgtcgcggcagcgcaggccagcgcggtcgctccgttcgaggtcgaaggacgcgag
aacccgtacacgatccagcaggacctgcagcaggcgatgaacgacctggtcggcatcatc
cgcgagggctccgagctggagcaggcgctgcaggaggtcgagcggctcaaggagcgggcc
acgcagatgcacgtcgagggcaaccggcagtacaacccgggctggcacctcgcgatcgac
ctgcgcaacatgctgctggtgggggagtgcgtcgccaaggccgcgctcgcgcgccaggag
tcgcgcggcggccacacccgcgacgacttccccggccccgatcccgagtggggcggcaag
aacctcgtgctgcgactcaacaccgagggcaccggggtcgacctgaccgagcaggccatc
ccggggatgcccgccgagctgaagaaattcttcgaggagtga
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